Re: decoders install problem

• To: Enils Bashi <EBashi@xxxxxxxxxxxxxxxxx>
• Subject: Re: decoders install problem
• From: Robb Kambic <rkambic@xxxxxxxxxxxxxxxx>
• Date: Mon, 8 Dec 2003 11:17:25 -0700 (MST)

On Mon, 8 Dec 2003, Enils Bashi wrote:

Hi,

I am trying to build the decoders-3.0.1 package on a RH 9 pentium 3 dual
processor machine. I have built netcdf, ldm and udunits. I have edited the
CUSTOMIZED folder but I am running into some problems with make. Here it is:



making `all' in directory /data/decoders-3.0.1/src/gribtonc

make[1]: Entering directory `/data/decoders-3.0.1/src/gribtonc'
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG emalloc.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gbds.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gbytem.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gdes.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG get_prod.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG grib1.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gribtypes.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG inetutil.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG levels.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG params.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG product_data.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG quasi.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG timeunits.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG user_param.c
gcc -c -g -DNO_REPLACE_SYSLOG -DLOGNAME_ISSOCK
-I/usr/local/netcdf-3.5.0/include
 -I/data/udunits-1.11.7/include -DDEBUG ulog.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG centers.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gribdump.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG models.c
gcc -g emalloc.o gbds.o gbytem.o gdes.o get_prod.o grib1.o gribtypes.o
inetutil.
o levels.o params.o product_data.o quasi.o timeunits.o user_param.o ulog.o
cente
rs.o gribdump.o models.o  -lm  -o gribdump
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG gribtonc.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG mkdirs_open.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG nc.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG ncfloat.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG nuwg.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG recs.c
gcc -c -g -I/usr/local/netcdf-3.5.0/include -I/data/udunits-1.11.7/include
-DDEB
UG units.c
gcc -g emalloc.o gbds.o gbytem.o gdes.o get_prod.o grib1.o gribtypes.o
inetutil.
o levels.o params.o product_data.o quasi.o timeunits.o user_param.o ulog.o
gribt
onc.o mkdirs_open.o nc.o ncfloat.o nuwg.o recs.o units.o \
      -L/usr/local/netcdf-3.5.0/lib -lnetcdf  -L/data/udunits-1.11.7/lib
-luduni
ts -ludport -lm  -o gribtonc
/usr/local/netcdf-3.5.0/lib/libnetcdf.a(string.o)(.text+0x37): In function
`NC_c
heck_name':
: undefined reference to `__ctype_b'
/data/udunits-1.11.7/lib/libudunits.a(utlib.o)(.text+0xde6): In function
`Decode
Unit':
: undefined reference to `__ctype_b'
/data/udunits-1.11.7/lib/libudunits.a(utlib.o)(.text+0xe34): In function
`Decode
Unit':
: undefined reference to `__ctype_b'
/data/udunits-1.11.7/lib/libudunits.a(utlib.o)(.text+0xfaf): In function
`ScanUn
it':
: undefined reference to `__ctype_b'
collect2: ld returned 1 exit status
make[1]: *** [gribtonc] Error 1
make[1]: Leaving directory `/data/decoders-3.0.1/src/gribtonc'
make: *** [gribtonc/all] Error 1

Any and all feedback would be greatly appreciated

Enils,

_From Steve Emmerson,

The symbol "__ctype_b" isn't directly referenced by either the netCDF
or the UDUNITS packages.  It is part of the GNU C 2.2 runtime: the
isdigit() family of C macros references it.  The symbol is not part of
the GNU C 2.3 runtime, however.  Consequently, code compiled by GNU C
2.2 that references the symbol can not link under GNU C 2.3.

I suspect this is their problem.

Regards,
Steve Emmerson

So the solution is to use the same version of the gcc compiler to compile
the packages netCDF, Udunits, and gribtonc.

% gcc -v

Robb...

Enils Bashi
Programmer - Chesapeake Bay Program
Veridyne Incorporated
Annapolis, Maryland: (410) 267-9833
www.chesapeakebay.net

==============================================================================
Robb Kambic                                Unidata Program Center
Software Engineer III                      Univ. Corp for Atmospheric Research
rkambic@xxxxxxxxxxxxxxxx                   WWW: http://www.unidata.ucar.edu/
==============================================================================