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Re: [idvusers] [libcf] [ldm-users] [netcdfgroup] ERROR in linking netcdf libraries (ld: 0711-317 ERROR: Undefined symbol: .nf_open)

  • To: "Kevin W. Thomas" <kwthomas@xxxxxxxxxxxxxxxxxx>
  • Subject: Re: [idvusers] [libcf] [ldm-users] [netcdfgroup] ERROR in linking netcdf libraries (ld: 0711-317 ERROR: Undefined symbol: .nf_open)
  • From: Elektroniska <elektroniska@xxxxxxxxx>
  • Date: Sun, 14 Oct 2012 11:39:28 -0400
please remove the lists from your communications and directly respond to the person. I do not think this is a major problem that everyone is interested to know and you should take into account that several hundred are registered in this list. 

thanks


On 10/14/2012 11:10 AM, Kevin W. Thomas wrote:

Arun

Did you also download the Fortran element of NetCDF4? Grab, and run
make on this: http://www.unidata.ucar.edu/downloads/netcdf/ftp/netcdf-4.0.tar.gz
and see if things don't get better. NetCDF has separated C and Fortran
bindings. I believe this is in the belief that no one uses Fortran
anymore.

gerry

Linkage rules have changed with netCDF.  It is now "-lnetcdff -lnetcdf".  The
Fortran interface is in its own library, libnetcdff.

        Kevin W. Thomas
        Center for Analysis and Prediction of Storms
        University of Oklahoma
        Norman, Oklahoma
        Email:  kwthomas@xxxxxx


On Fri, Oct 12, 2012 at 1:42 PM, Arun Ramanathan
<s.arunramanathan19@xxxxxxxxx> wrote:

hi,
     I have installed netcdf version 4.1.3 . I ran make check and i did not
get any error and my netcdf installation was fine. i used disable netcdf 4
option during configuring netcdf. But when i compile some program involving
netcdf commands like nf_open or NF90_OPEN .,etc i get the following errors.


**** Compiling ARWpost ****

         xlf90_r -qfree=f90 -L/home/mandal/arun/lib -lm -o ARWpost.exe
module_model_basics.o constants_module.o gridinfo_module.o ARWpost.o
input_module.o output_module.o module_map_utils.o misc_definitions_module.o
module_date_pack.o module_debug.o process_domain_module.o
module_get_file_names.o module_interp.o module_basic_arrays.o
module_diagnostics.o module_arrays.o module_pressure.o module_calc_height.o
module_calc_pressure.o module_calc_theta.o module_calc_tk.o module_calc_tc.o
module_calc_td.o module_calc_td2.o module_calc_rh.o module_calc_rh2.o
module_calc_uvmet.o module_calc_slp.o module_calc_dbz.o module_calc_cape.o
module_calc_wdir.o module_calc_wspd.o module_calc_clfr.o
-L/home/mandal/arun/netcdf/lib -I/home/mandal/arun/netcdf/include  -lnetcdf
ld: 0711-317 ERROR: Undefined symbol: .nf_open
ld: 0711-317 ERROR: Undefined symbol: .nf_inq
ld: 0711-317 ERROR: Undefined symbol: .nf_inq_dim
ld: 0711-317 ERROR: Undefined symbol: .nf_inq_var
ld: 0711-317 ERROR: Undefined symbol: .ncvgt
ld: 0711-317 ERROR: Undefined symbol: .nf_get_att_text
ld: 0711-317 ERROR: Undefined symbol: .nf_get_att_int
ld: 0711-317 ERROR: Undefined symbol: .nf_get_att_real
ld: 0711-317 ERROR: Undefined symbol: .nf_inq_attname
ld: 0711-317 ERROR: Undefined symbol: .nf_inq_att
ld: 0711-317 ERROR: Undefined symbol: .nf_close
ld: 0711-317 ERROR: Undefined symbol: .nf_inq_varid
ld: 0711-317 ERROR: Undefined symbol: .nf_get_vara_text
ld: 0711-317 ERROR: Undefined symbol: .nf_get_var_real
ld: 0711-345 Use the -bloadmap or -bnoquiet option to obtain more
information.
make: 1254-004 The error code from the last command is 8.
make: 1254-005 Ignored error code 8 from last command.
Target "all" is up to date.


Please help me find my problem. Is the problem in setting my linker flag ,
cflag paths or with my netcdf installation ?


with regards,
ARUN RAMANATHAN.S

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