Re: [netcdfgroup] netcdfgroup Digest, Vol 111, Issue 1

• To: netcdfgroup@xxxxxxxxxxxxxxxx
• Subject: Re: [netcdfgroup] netcdfgroup Digest, Vol 111, Issue 1
• From: Quincey Koziol <koziol@xxxxxxxxxxxx>
• Date: Sun, 29 Jun 2008 22:16:23 -0500

Hi Momme,

On Jun 29, 2008, at 1:00 PM, netcdfgroup-request@xxxxxxxxxxxxxxxx wrote:

Date: Sun, 29 Jun 2008 16:20:55 +0100
From: Momme Butensch?n <mommebu@xxxxxxxx>
Subject: [netcdfgroup] problems with compilation: H5DS routines
        undefined
To: netcdfgroup@xxxxxxxxxxxxxxxx
Message-ID: <4867A857.4020306@xxxxxxxx>
Content-Type: text/plain; charset=ISO-8859-1; format=flowed

When compiling a program linking with netcdf4, hdf5 I get the following

error:

ifort -r8 -O2 -o ../../../bin/opa model.o ../../../lib/oce/libopa.a
.../../../lib/libioipsl.a -L/opt/netCDF-4/lib -lnetcdff -lnetcdf
-L/opt/hdf5/lib -lhdf5

/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSget_num_scales'

/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSset_scale'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSis_scale'

/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSiterate_scales' /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSget_scale_name' /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSattach_scale' /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSdetach_scale'

gmake[1]: *** [../../../bin/opa] Error 1


nm of libnetcdf.a and libnetcdf.so gives

        U H5DSget_num_scales

Any ideas what's going wrong?

        Quincey