Re: [netcdfgroup] compiling on a 64 bit machine with ifort support

• To: Karsten Bolding <karsten@xxxxxxxxxxxxxxxxxxxx>
• Subject: Re: [netcdfgroup] compiling on a 64 bit machine with ifort support
• From: Karsten Bolding <karsten@xxxxxxxxxxxxxxxxxxxx>
• Date: Wed, 19 Aug 2009 14:38:55 +0000

if I do --disable-f77 I can compile but will of course not get e.g.
netcdf.inc

On Wed, Aug 19, 2009 at 02:21:32 +0000, Karsten Bolding wrote:
> Hello
> 
> I can't get the compilation of NetCDF with ifort Fortran support to
> work:
> 
> kb@nc20:~$ uname -a
> Linux nc20 2.6.28-15-generic #49-Ubuntu SMP Tue Aug 18 19:25:34 UTC 2009
> x86_64 GNU/Linux
> 
> 
> 
> ver=4.1-beta1-snapshot2009080400
> 
> ./configure --prefix=/opt/netcdf-$ver --enable-netcdf-4 
> --with-hdf5=/opt/hdf5-1.8.3 --enable-shared
> 
> I get:
> make[3]: Entering directory
> `/home/kb/compile/netcdf-4.1-beta1-snapshot2009080400/fortran'
> /bin/bash ../libtool   --mode=link ifort  -fPIC -L/opt/hdf5-1.8.3/lib
> -version-info 5:0:0   -o libnetcdff.la -rpath
> /opt/netcdf-4.1-beta1-snapshot2009080400/lib fort-attio.lo
> fort-control.lo fort-dim.lo fort-genatt.lo fort-geninq.lo fort-genvar.lo
> fort-lib.lo fort-misc.lo fort-v2compat.lo fort-vario.lo fort-var1io.lo
> fort-varaio.lo fort-varmio.lo fort-varsio.lo fort-nc4.lo
> ../libsrc4/libnetcdf.la  ../f90/libnetcdff90.la 
> libtool: link: ifort -shared -nofor_main  .libs/fort-attio.o
> .libs/fort-control.o .libs/fort-dim.o .libs/fort-genatt.o
> .libs/fort-geninq.o .libs/fort-genvar.o .libs/fort-lib.o
> .libs/fort-misc.o .libs/fort-v2compat.o .libs/fort-vario.o
> .libs/fort-var1io.o .libs/fort-varaio.o .libs/fort-varmio.o
> .libs/fort-varsio.o .libs/fort-nc4.o   -Wl,--whole-archive
> ../f90/.libs/libnetcdff90.a -Wl,--no-whole-archive  -Wl,-rpath
> -Wl,/home/kb/compile/netcdf-4.1-beta1-snapshot2009080400/libsrc4/.libs
> -Wl,-rpath -Wl,/opt/netcdf-4.1-beta1-snapshot2009080400/lib
> -L/opt/hdf5-1.8.3/lib ../libsrc4/.libs/libnetcdf.so
> -L/opt/hdf5-1.8.3//lib    -Wl,-soname -Wl,libnetcdff.so.5 -o
> .libs/libnetcdff.so.5.0.0
> ld: ../f90/.libs/libnetcdff90.a(netcdf4.o): relocation R_X86_64_32S
> against `a local symbol' can not be used when making a shared object;
> recompile with -fPIC
> ../f90/.libs/libnetcdff90.a(netcdf4.o): could not read symbols: Bad
> value
> make[3]: *** [libnetcdff.la] Error 1
> make[3]: Leaving directory
> `/home/kb/compile/netcdf-4.1-beta1-snapshot2009080400/fortran'
> make[2]: *** [all] Error 2
> make[2]: Leaving directory
> `/home/kb/compile/netcdf-4.1-beta1-snapshot2009080400/fortran'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory
> `/home/kb/compile/netcdf-4.1-beta1-snapshot2009080400'
> make: *** [all] Error 2
> 
> 
> I've tried to set FFLAGS and FCFLAGS to -fPIC without any difference
> 
> If I ommit --enable-shared I can compile with Fortran support - but then
> other things break.
> 
> Karsten
> 
> Karsten
> 
> 
> 
> 
> -- 
> ----------------------------------------------------------------------
> Karsten Bolding                    Bolding & Burchard ApS
> Strandgyden 25                     Phone: +45 64422058
> DK-5466 Asperup                    Fax:   +45 64422068
> Denmark                            Email: karsten@xxxxxxxxxxxxxxxxxxxx
> 
> http://www.findvej.dk/Strandgyden25,5466,11,3
> 
> Q: What is irony?
> A: Almost the same as goldy and bronzy - just made of iron ...
> (from Blackadder)
> ----------------------------------------------------------------------
> 

-- 
----------------------------------------------------------------------
Karsten Bolding                    Bolding & Burchard ApS
Strandgyden 25                     Phone: +45 64422058
DK-5466 Asperup                    Fax:   +45 64422068
Denmark                            Email: karsten@xxxxxxxxxxxxxxxxxxxx

http://www.findvej.dk/Strandgyden25,5466,11,3

Q: What is irony?
A: Almost the same as goldy and bronzy - just made of iron ...
(from Blackadder)
----------------------------------------------------------------------

• References:
  • [netcdfgroup] compiling on a 64 bit machine with ifort support
    • From: Karsten Bolding