NOTICE: This version of the NSF Unidata web site (archive.unidata.ucar.edu) is no longer being updated.
Current content can be found at unidata.ucar.edu.
To learn about what's going on, see About the Archive Site.
Hello,I have a problem: NetCDF 4.0.1 adds the following lines to netcdf.h (HDF5 is, in fact, built without parallel I/O support.):
===/* These defs added by netCDF configure because parallel HDF5 is not present. */
#define MPI_Comm int #define MPI_Info int #define MPI_COMM_WORLD 0 #define MPI_INFO_NULL 0 ===This (it seems to me) makes it impossible to use MPI (or PETSc) with NetCDF, producing warnings like
=== /opt/local/include/netcdf.h:43:1: warning: "MPI_COMM_WORLD" redefinedIn file included from /Users/constantine/Documents/PISM/petsc-3.0.0-p0/ include/petsc.h:137, from /Users/constantine/Documents/PISM/petsc-3.0.0- p0/include/petscis.h:7, from /Users/constantine/Documents/PISM/petsc-3.0.0- p0/include/petscvec.h:9, from /Users/constantine/Documents/PISM/petsc-3.0.0- p0/include/petscda.h:7,
from ../src/base/grid.cc:20: === and errors similar to ===../src/base/grid.cc:64: error: invalid conversion from ‘int’ to ‘ompi_communicator_t*’
===NetCDF 4.0.1 built without --enable-netcdf-4 works fine with the same code.
Please let me know if this is the intended behavior, if I'm doing something wrong, etc.
Thank you! -- Constantine Khroulev PISM (www.pism-docs.org) Developer/Maintainer University of Alaska Fairbanks
netcdfgroup
archives: