NOTICE: This version of the NSF Unidata web site (archive.unidata.ucar.edu) is no longer being updated.
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NOTICE: This version of the NSF Unidata web site (archive.unidata.ucar.edu) is no longer being updated.
Current content can be found at unidata.ucar.edu.
To learn about what's going on, see About the Archive Site.
Which Fortran and which C compiler are you using? many of the fortrans for the Mac will not work with certain versions of the Apple C compiler. You can either use the C compiler and Fortrans from fink, use g95 with the Apple C compiler, or if you want to stay with gfortran get the appropriate version from http://R.research.att.com/tools/. -Roy On May 8, 2011, at 8:14 PM, Victor Muñoz wrote: > Dear all, > > I want to install the MMTK. I need the netCDF but when I try to install it I > get an error. I run the configure command like this: > > ./configure --prefix=/lib --disable-netcdf-4 --enable-shared > > and I get this error: > > checking if Fortran "byte" is C "signed char"... configure: error: Could not > link conftestf.o and conftest.o > > I guess that's why I get this other error when running make check install: > > make: *** No rule to make target `check'. Stop. > > I'm working on a Mac OS X version 10.6.7. I'm trying to install the netCDF > 4.1.2. At the end of the mail you will find the configure.log file. > > Thanks for your help. > > Kind Regards, > > Victor Muñoz > > ------------------------------------------------------------------------------------------------------------------------------------------ > > This file contains any messages produced by compilers while > running configure, to aid debugging if configure makes a mistake. > > It was created by netCDF configure 4.1.2, which was > generated by GNU Autoconf 2.68. Invocation command line was > > $ ./configure --prefix=/lib --disable-netcdf-4 --enable-shared > > ## --------- ## > ## Platform. ## > ## --------- ## > > hostname = Victor-Munozs-MacBook-Pro.local > uname -m = x86_64 > uname -r = 10.7.3 > uname -s = Darwin > uname -v = Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011; > root:xnu-1504.14.2~1/RELEASE_X86_64 > > /usr/bin/uname -p = i386 > /bin/uname -X = unknown > > /bin/arch = unknown > /usr/bin/arch -k = unknown > /usr/convex/getsysinfo = unknown > /usr/bin/hostinfo = Mach kernel version: > Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011; > root:xnu-1504.14.2~1/RELEASE_X86_64 > Kernel configured for up to 8 processors. > 4 processors are physically available. > 8 processors are logically available. > Processor type: i486 (Intel 80486) > Processors active: 0 1 2 3 4 5 6 7 > Primary memory available: 8.00 gigabytes > Default processor set: 55 tasks, 326 threads, 8 processors > Load average: 0.27, Mach factor: 7.72 > /bin/machine = unknown > /usr/bin/oslevel = unknown > /bin/universe = unknown > > PATH: /usr/bin > PATH: /bin > PATH: /usr/sbin > PATH: /sbin > PATH: /usr/local/bin > PATH: /usr/X11/bin > > > ## ----------- ## > ## Core tests. ## > ## ----------- ## > > configure:3149: netCDF 4.1.2 > configure:3189: checking build system type > configure:3203: result: x86_64-apple-darwin10.7.3 > configure:3223: checking host system type > configure:3236: result: x86_64-apple-darwin10.7.3 > configure:3258: checking target system type > configure:3271: result: x86_64-apple-darwin10.7.3 > configure:3322: checking for a BSD-compatible install > configure:3390: result: /usr/bin/install -c > configure:3401: checking whether build environment is sane > configure:3451: result: yes > configure:3592: checking for a thread-safe mkdir -p > configure:3631: result: ./install-sh -c -d > configure:3644: checking for gawk > configure:3674: result: no > configure:3644: checking for mawk > configure:3674: result: no > configure:3644: checking for nawk > configure:3674: result: no > configure:3644: checking for awk > configure:3660: found /usr/bin/awk > configure:3671: result: awk > configure:3682: checking whether make sets $(MAKE) > configure:3704: result: yes > configure:3788: checking user options > configure:3798: checking whether CXX is set to '' > configure:3802: result: no > configure:3806: checking whether FC is set to '' > configure:3810: result: no > configure:3814: checking whether F90 is set to '' > configure:3818: result: no > configure:3822: checking whether a NCIO_MINBLOCKSIZE was specified > configure:3832: result: 256 > configure:3840: checking whether udunits is to be built > configure:3849: result: no > configure:3852: checking if fsync support is enabled > configure:3860: result: yes > configure:3869: checking whether extra valgrind tests should be run > configure:3877: result: no > configure:3900: checking whether libcf is to be built > configure:3909: result: no > configure:3921: checking whether a location for the HDF4 library was specified > configure:3929: result: > configure:3935: checking whether reading of HDF4 SD files is to be enabled > configure:3937: result: no > configure:3941: checking whether to fetch some sample HDF4 files from Unidata > ftp site to test HDF4 reading (requires wget) > configure:3954: result: no > configure:3958: checking whether parallel I/O for classic and 64-bit offset > files using parallel-netcdf is to be enabled > configure:3966: result: no > configure:3970: checking whether a location for the parallel-netcdf library > was specified > configure:3979: result: no > configure:3990: checking whether new netCDF-4 C++ API is to be built > configure:4001: result: no > configure:4008: checking whether extra example tests should be run > configure:4016: result: no > configure:4020: checking whether parallel IO tests should be run > configure:4028: result: no > configure:4032: checking whether a location for the HDF5 library was specified > configure:4040: result: > configure:4046: checking whether a location for the ZLIB library was specified > configure:4054: result: > configure:4060: checking whether a location for the SZLIB library was > specified > configure:4068: result: > configure:4074: checking whether a default chunk size in bytes was specified > configure:4084: result: 4194304 > configure:4093: checking whether a maximum per-variable cache size for HDF5 > was specified > configure:4103: result: 67108864 > configure:4112: checking whether a number of chunks for the default > per-variable cache was specified > configure:4122: result: 10 > configure:4131: checking whether a default file cache size for HDF5 was > specified > configure:4141: result: 4194304 > configure:4150: checking whether a default file cache maximum number of > elements for HDF5 was specified > configure:4160: result: 1009 > configure:4169: checking whether a default cache preemption for HDF5 was > specified > configure:4179: result: 0.75 > configure:4188: checking whether netCDF-4 logging is enabled > configure:4196: result: no > configure:4200: checking whether cdmremote client is to be built > configure:4210: result: no > configure:4227: checking whether DAP client is to be built > configure:4235: result: yes > configure:4254: checking whether a path for curl-config was specified > configure:4257: result: no > configure:4265: checking whether a location for curl installation was > specified > configure:4274: result: no > configure:4330: checking checking whether a location for curl-config found > configure:4336: result: curl-config > configure:4383: checking whether dap remote testing should be enabled > (default on) > configure:4394: result: yes > configure:4419: checking whether the time-consuming dap tests should be > enabled (default off) > configure:4430: result: no > configure:4443: checking whether netCDF extra tests should be run (developers > only) > configure:4451: result: no > configure:4468: checking whether Fortran compiler(s) should be tested during > configure > configure:4476: result: yes > configure:4480: checking whether FFIO will be used > configure:4488: result: no > configure:4504: checking whether to skip C++, F77, or F90 APIs if compiler is > broken > configure:4512: result: yes > configure:4516: checking whether only the C library is desired > configure:4524: result: no > configure:4543: checking whether examples should be built > configure:4551: result: yes > configure:4563: checking whether F77 API is desired > configure:4572: result: yes > configure:4577: checking whether any Fortran API is desired > configure:4585: result: yes > configure:4590: checking whether F90 API is desired > configure:4600: result: yes > configure:4604: checking whether fortran type sizes should be checked > configure:4612: result: yes > configure:4618: checking whether C API is desired > configure:4626: result: yes > configure:4633: checking where to get netCDF C-only library for separate > fortran libraries > configure:4649: result: > configure:4661: checking whether CXX API is desired > configure:4670: result: yes > configure:4679: checking whether v2 netCDF API should be built > configure:4687: result: yes > configure:4706: checking whether the ncgen/ncdump/nccopy should be built > configure:4715: result: yes > configure:4727: checking whether large file (> 2GB) tests should be run > configure:4735: result: no > configure:4752: checking whether benchmaks should be run (experimental) > configure:4760: result: no > configure:4772: checking whether extreme numbers should be used in tests > configure:4787: result: yes > configure:4799: checking where to put large temp files if large file tests > are run > configure:4808: result: . > configure:4819: checking whether a win32 DLL is desired > configure:4827: result: no > configure:4849: checking whether separate fortran libs are desired > configure:4857: result: yes > configure:4892: finding C compiler > configure:4949: checking for xlc > configure:4979: result: no > configure:4949: checking for cc > configure:4965: found /usr/bin/cc > configure:4976: result: cc > configure:5007: checking for C compiler version > configure:5016: cc --version >&5 > i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3) > Copyright (C) 2007 Free Software Foundation, Inc. > This is free software; see the source for copying conditions. There is NO > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > > configure:5027: $? = 0 > configure:5016: cc -v >&5 > Using built-in specs. > Target: i686-apple-darwin10 > Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking > --enable-werror --prefix=/usr --mandir=/share/man > --enable-languages=c,objc,c++,obj-c++ > --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib > --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10- > --host=x86_64-apple-darwin10 --target=i686-apple-darwin10 > --with-gxx-include-dir=/include/c++/4.2.1 > Thread model: posix > gcc version 4.2.1 (Apple Inc. build 5666) (dot 3) > configure:5027: $? = 0 > configure:5016: cc -V >&5 > gcc-4.2: argument to `-V' is missing > configure:5027: $? = 1 > configure:5016: cc -qversion >&5 > i686-apple-darwin10-gcc-4.2.1: no input files > configure:5027: $? = 1 > configure:5047: checking whether the C compiler works > configure:5069: cc conftest.c >&5 > configure:5073: $? = 0 > configure:5121: result: yes > configure:5124: checking for C compiler default output file name > configure:5126: result: a.out > configure:5132: checking for suffix of executables > configure:5139: cc -o conftest conftest.c >&5 > configure:5143: $? = 0 > configure:5165: result: > configure:5187: checking whether we are cross compiling > configure:5195: cc -o conftest conftest.c >&5 > configure:5199: $? = 0 > configure:5206: ./conftest > configure:5210: $? = 0 > configure:5225: result: no > configure:5230: checking for suffix of object files > configure:5252: cc -c conftest.c >&5 > configure:5256: $? = 0 > configure:5277: result: o > configure:5281: checking whether we are using the GNU C compiler > configure:5300: cc -c conftest.c >&5 > configure:5300: $? = 0 > configure:5309: result: yes > configure:5318: checking whether cc accepts -g > configure:5338: cc -c -g conftest.c >&5 > configure:5338: $? = 0 > configure:5379: result: yes > configure:5396: checking for cc option to accept ISO C89 > configure:5460: cc -c -g -O2 conftest.c >&5 > configure:5460: $? = 0 > configure:5473: result: none needed > configure:5504: checking for style of include used by make > configure:5532: result: GNU > configure:5557: checking dependency style of cc > configure:5667: result: gcc3 > configure:5686: checking whether cc understands -c and -o together > configure:5714: cc -c conftest.c -o conftest2.o >&5 > configure:5718: $? = 0 > configure:5724: cc -c conftest.c -o conftest2.o >&5 > configure:5728: $? = 0 > configure:5783: result: yes > configure:5809: checking for an ANSI C-conforming const > configure:5874: cc -c -g -O2 conftest.c >&5 > configure:5874: $? = 0 > configure:5881: result: yes > configure:5906: cc -c conftest.c >&5 > configure:5906: $? = 0 > configure:5912: checking whether a CURLOPT_KEYPASSWD is defined > configure:5914: result: yes > configure:5943: finding Fortran compiler (will not be used if Fortran API is > not desired) > configure:6223: checking for xlf90 > configure:6253: result: no > configure:6223: checking for fort > configure:6253: result: no > configure:6223: checking for xlf95 > configure:6253: result: no > configure:6223: checking for ifort > configure:6253: result: no > configure:6223: checking for ifc > configure:6253: result: no > configure:6223: checking for efc > configure:6253: result: no > configure:6223: checking for pgf95 > configure:6253: result: no > configure:6223: checking for lf95 > configure:6253: result: no > configure:6223: checking for g95 > configure:6253: result: no > configure:6223: checking for gfortran > configure:6239: found /usr/local/bin/gfortran > configure:6250: result: gfortran > configure:6276: checking for Fortran compiler version > configure:6285: gfortran --version >&5 > GNU Fortran (GCC) 4.2.3 > Copyright (C) 2007 Free Software Foundation, Inc. > > GNU Fortran comes with NO WARRANTY, to the extent permitted by law. > You may redistribute copies of GNU Fortran > under the terms of the GNU General Public License. > For more information about these matters, see the file named COPYING > > configure:6296: $? = 0 > configure:6285: gfortran -v >&5 > Using built-in specs. > Target: i686-apple-darwin8 > Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local > --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ > --build=i686-apple-darwin8 --host=i686-apple-darwin8 > --target=i686-apple-darwin8 --enable-languages=fortran > Thread model: posix > gcc version 4.2.3 > configure:6296: $? = 0 > configure:6285: gfortran -V >&5 > gfortran: argument to `-V' is missing > configure:6296: $? = 1 > configure:6285: gfortran -qversion >&5 > i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion' > i686-apple-darwin8-gfortran-4.2: no input files > configure:6296: $? = 1 > configure:6305: checking whether we are using the GNU Fortran compiler > configure:6318: gfortran -c conftest.F >&5 > configure:6318: $? = 0 > configure:6327: result: yes > configure:6333: checking whether gfortran accepts -g > configure:6344: gfortran -c -g conftest.f >&5 > configure:6344: $? = 0 > configure:6352: result: yes > configure:6443: checking for xlf > configure:6473: result: no > configure:6443: checking for fort > configure:6473: result: no > configure:6443: checking for xlf95 > configure:6473: result: no > configure:6443: checking for ifort > configure:6473: result: no > configure:6443: checking for ifc > configure:6473: result: no > configure:6443: checking for efc > configure:6473: result: no > configure:6443: checking for pgf77 > configure:6473: result: no > configure:6443: checking for lf95 > configure:6473: result: no > configure:6443: checking for g95 > configure:6473: result: no > configure:6443: checking for gfortran > configure:6459: found /usr/local/bin/gfortran > configure:6470: result: gfortran > configure:6496: checking for Fortran 77 compiler version > configure:6505: gfortran --version >&5 > GNU Fortran (GCC) 4.2.3 > Copyright (C) 2007 Free Software Foundation, Inc. > > GNU Fortran comes with NO WARRANTY, to the extent permitted by law. > You may redistribute copies of GNU Fortran > under the terms of the GNU General Public License. > For more information about these matters, see the file named COPYING > > configure:6516: $? = 0 > configure:6505: gfortran -v >&5 > Using built-in specs. > Target: i686-apple-darwin8 > Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local > --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ > --build=i686-apple-darwin8 --host=i686-apple-darwin8 > --target=i686-apple-darwin8 --enable-languages=fortran > Thread model: posix > gcc version 4.2.3 > configure:6516: $? = 0 > configure:6505: gfortran -V >&5 > gfortran: argument to `-V' is missing > configure:6516: $? = 1 > configure:6505: gfortran -qversion >&5 > i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion' > i686-apple-darwin8-gfortran-4.2: no input files > configure:6516: $? = 1 > configure:6525: checking whether we are using the GNU Fortran 77 compiler > configure:6538: gfortran -c conftest.F >&5 > configure:6538: $? = 0 > configure:6547: result: yes > configure:6553: checking whether gfortran accepts -g > configure:6564: gfortran -c -g conftest.f >&5 > configure:6564: $? = 0 > configure:6572: result: yes > configure:6618: setting up Fortran 90 > configure:6637: checking for Fortran flag to compile .f90 files > configure:6653: gfortran -c -g -O2 conftest.f90 >&5 > configure:6653: $? = 0 > configure:6662: result: none > configure:6690: checking fortran 90 modules inclusion flag > configure:6715: gfortran -c -g -O2 conftest.f90 >&5 > configure:6715: $? = 0 > configure:6732: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5 > configure:6732: $? = 0 > configure:6751: result: -I > configure:6763: checking if Fortran compiler can handle Fortran-90 > configure:6771: gfortran -g -O2 conftest.f90 > configure:6774: $? = 0 > configure:6786: result: yes > configure:6795: finding C++ compiler (will not be used if C++ API is not > desired) > configure:6863: checking for g++ > configure:6879: found /usr/bin/g++ > configure:6890: result: g++ > configure:6917: checking for C++ compiler version > configure:6926: g++ --version >&5 > i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3) > Copyright (C) 2007 Free Software Foundation, Inc. > This is free software; see the source for copying conditions. There is NO > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > > configure:6937: $? = 0 > configure:6926: g++ -v >&5 > Using built-in specs. > Target: i686-apple-darwin10 > Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking > --enable-werror --prefix=/usr --mandir=/share/man > --enable-languages=c,objc,c++,obj-c++ > --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib > --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10- > --host=x86_64-apple-darwin10 --target=i686-apple-darwin10 > --with-gxx-include-dir=/include/c++/4.2.1 > Thread model: posix > gcc version 4.2.1 (Apple Inc. build 5666) (dot 3) > configure:6937: $? = 0 > configure:6926: g++ -V >&5 > g++-4.2: argument to `-V' is missing > configure:6937: $? = 1 > configure:6926: g++ -qversion >&5 > i686-apple-darwin10-g++-4.2.1: no input files > configure:6937: $? = 1 > configure:6941: checking whether we are using the GNU C++ compiler > configure:6960: g++ -c conftest.cpp >&5 > configure:6960: $? = 0 > configure:6969: result: yes > configure:6978: checking whether g++ accepts -g > configure:6998: g++ -c -g conftest.cpp >&5 > configure:6998: $? = 0 > configure:7039: result: yes > configure:7064: checking dependency style of g++ > configure:7174: result: gcc3 > configure:7245: setting up libtool > configure:7294: checking how to print strings > configure:7321: result: printf > configure:7342: checking for a sed that does not truncate output > configure:7406: result: /usr/bin/sed > configure:7424: checking for grep that handles long lines and -e > configure:7482: result: /usr/bin/grep > configure:7487: checking for egrep > configure:7549: result: /usr/bin/grep -E > configure:7554: checking for fgrep > configure:7616: result: /usr/bin/grep -F > configure:7651: checking for ld used by cc > configure:7718: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld > configure:7725: checking if the linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld > configure:7740: result: no > configure:7752: checking for BSD- or MS-compatible name lister (nm) > configure:7801: result: /usr/bin/nm > configure:7931: checking the name lister (/usr/bin/nm) interface > configure:7938: cc -c -g -O2 conftest.c >&5 > configure:7941: /usr/bin/nm "conftest.o" > configure:7944: output > 0000000000000188 D _some_variable > configure:7951: result: BSD nm > configure:7954: checking whether ln -s works > configure:7958: result: yes > configure:7966: checking the maximum length of command line arguments > configure:8091: result: 196608 > configure:8108: checking whether the shell understands some XSI constructs > configure:8118: result: yes > configure:8122: checking whether the shell understands "+=" > configure:8128: result: yes > configure:8163: checking how to convert x86_64-apple-darwin10.7.3 file names > to x86_64-apple-darwin10.7.3 format > configure:8203: result: func_convert_file_noop > configure:8210: checking how to convert x86_64-apple-darwin10.7.3 file names > to toolchain format > configure:8230: result: func_convert_file_noop > configure:8237: checking for /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld > option to reload object files > configure:8244: result: -r > configure:8318: checking for objdump > configure:8348: result: no > configure:8374: checking how to recognize dependent libraries > configure:8576: result: pass_all > configure:8661: checking for dlltool > configure:8691: result: no > configure:8718: checking how to associate runtime and link libraries > configure:8745: result: printf %s\n > configure:8805: checking for ar > configure:8821: found /usr/bin/ar > configure:8832: result: ar > configure:8869: checking for archiver @FILE support > configure:8886: cc -c -g -O2 conftest.c >&5 > configure:8886: $? = 0 > configure:8889: ar cru libconftest.a @conftest.lst >&5 > ar: @conftest.lst: No such file or directory > configure:8892: $? = 1 > configure:8912: result: no > configure:8970: checking for strip > configure:8986: found /usr/bin/strip > configure:8997: result: strip > configure:9069: checking for ranlib > configure:9085: found /usr/bin/ranlib > configure:9096: result: ranlib > configure:9198: checking command to parse /usr/bin/nm output from cc object > configure:9317: cc -c -g -O2 conftest.c >&5 > configure:9320: $? = 0 > configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ > ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | > sed '/ __gnu_lto/d' \> conftest.nm > configure:9327: $? = 0 > cannot find nm_test_var in conftest.nm > configure:9317: cc -c -g -O2 conftest.c >&5 > configure:9320: $? = 0 > configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ > ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | > sed '/ __gnu_lto/d' \> conftest.nm > configure:9327: $? = 0 > configure:9393: cc -o conftest -g -O2 conftest.c conftstm.o >&5 > configure:9396: $? = 0 > configure:9434: result: ok > configure:9471: checking for sysroot > configure:9501: result: no > configure:9744: checking for mt > configure:9774: result: no > configure:9794: checking if : is a manifest tool > configure:9800: : '-?' > configure:9808: result: no > configure:9864: checking for dsymutil > configure:9880: found /usr/bin/dsymutil > configure:9891: result: dsymutil > configure:9956: checking for nmedit > configure:9972: found /usr/bin/nmedit > configure:9983: result: nmedit > configure:10048: checking for lipo > configure:10064: found /usr/bin/lipo > configure:10075: result: lipo > configure:10140: checking for otool > configure:10156: found /usr/bin/otool > configure:10167: result: otool > configure:10232: checking for otool64 > configure:10262: result: no > configure:10307: checking for -single_module linker flag > cc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c > configure:10334: result: yes > configure:10336: checking for -exported_symbols_list linker flag > configure:10356: cc -o conftest -g -O2 > -Wl,-exported_symbols_list,conftest.sym conftest.c >&5 > configure:10356: $? = 0 > configure:10366: result: yes > configure:10368: checking for -force_load linker flag > cc -g -O2 -c -o conftest.o conftest.c > ar cru libconftest.a conftest.o > ranlib libconftest.a > cc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a > configure:10398: result: yes > configure:10440: checking how to run the C preprocessor > configure:10471: cc -E conftest.c > configure:10471: $? = 0 > configure:10485: cc -E conftest.c > conftest.c:25:28: error: ac_nonexistent.h: No such file or directory > configure:10485: $? = 1 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "netCDF" > | #define PACKAGE_TARNAME "netcdf" > | #define PACKAGE_VERSION "4.1.2" > | #define PACKAGE_STRING "netCDF 4.1.2" > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx" > | #define PACKAGE_URL "" > | #define PACKAGE "netcdf" > | #define VERSION "4.1.2" > | #define NCIO_MINBLOCKSIZE 256 > | #define USE_FSYNC 1 > | #define DEFAULT_CHUNK_SIZE 4194304 > | #define MAX_DEFAULT_CACHE_SIZE 67108864 > | #define DEFAULT_CHUNKS_IN_CACHE 10 > | #define CHUNK_CACHE_SIZE 4194304 > | #define CHUNK_CACHE_NELEMS 1009 > | #define CHUNK_CACHE_PREEMPTION 0.75 > | #define USE_DAP 1 > | #define ENABLE_DAP 1 > | #define ENABLE_DAP_REMOTE_TESTS 1 > | #define USE_EXTREME_NUMBERS 1 > | #define TEMP_LARGE "." > | #define HAVE_CURLOPT_KEYPASSWD 1 > | /* end confdefs.h. */ > | #include <ac_nonexistent.h> > configure:10510: result: cc -E > configure:10530: cc -E conftest.c > configure:10530: $? = 0 > configure:10544: cc -E conftest.c > conftest.c:25:28: error: ac_nonexistent.h: No such file or directory > configure:10544: $? = 1 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "netCDF" > | #define PACKAGE_TARNAME "netcdf" > | #define PACKAGE_VERSION "4.1.2" > | #define PACKAGE_STRING "netCDF 4.1.2" > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx" > | #define PACKAGE_URL "" > | #define PACKAGE "netcdf" > | #define VERSION "4.1.2" > | #define NCIO_MINBLOCKSIZE 256 > | #define USE_FSYNC 1 > | #define DEFAULT_CHUNK_SIZE 4194304 > | #define MAX_DEFAULT_CACHE_SIZE 67108864 > | #define DEFAULT_CHUNKS_IN_CACHE 10 > | #define CHUNK_CACHE_SIZE 4194304 > | #define CHUNK_CACHE_NELEMS 1009 > | #define CHUNK_CACHE_PREEMPTION 0.75 > | #define USE_DAP 1 > | #define ENABLE_DAP 1 > | #define ENABLE_DAP_REMOTE_TESTS 1 > | #define USE_EXTREME_NUMBERS 1 > | #define TEMP_LARGE "." > | #define HAVE_CURLOPT_KEYPASSWD 1 > | /* end confdefs.h. */ > | #include <ac_nonexistent.h> > configure:10573: checking for ANSI C header files > configure:10593: cc -c -g -O2 conftest.c >&5 > configure:10593: $? = 0 > configure:10666: cc -o conftest -g -O2 conftest.c >&5 > configure:10666: $? = 0 > configure:10666: ./conftest > configure:10666: $? = 0 > configure:10677: result: yes > configure:10690: checking for sys/types.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for sys/stat.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for stdlib.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for string.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for memory.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for strings.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for inttypes.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for stdint.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10690: checking for unistd.h > configure:10690: cc -c -g -O2 conftest.c >&5 > configure:10690: $? = 0 > configure:10690: result: yes > configure:10704: checking for dlfcn.h > configure:10704: cc -c -g -O2 conftest.c >&5 > configure:10704: $? = 0 > configure:10704: result: yes > configure:11201: checking for objdir > configure:11216: result: .libs > configure:11487: checking if cc supports -fno-rtti -fno-exceptions > configure:11505: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 > cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not > for C > configure:11509: $? = 0 > configure:11522: result: no > configure:11832: checking for cc option to produce PIC > configure:11839: result: -fno-common -DPIC > configure:11847: checking if cc PIC flag -fno-common -DPIC works > configure:11865: cc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5 > configure:11869: $? = 0 > configure:11882: result: yes > configure:11911: checking if cc static flag -static works > configure:11939: result: no > configure:11954: checking if cc supports -c -o file.o > configure:11975: cc -c -g -O2 -o out/conftest2.o conftest.c >&5 > configure:11979: $? = 0 > configure:12001: result: yes > configure:12009: checking if cc supports -c -o file.o > configure:12056: result: yes > configure:12089: checking whether the cc linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries > configure:13247: result: yes > configure:13492: checking dynamic linker characteristics > configure:14228: result: darwin10.7.3 dyld > configure:14335: checking how to hardcode library paths into programs > configure:14360: result: immediate > configure:14900: checking whether stripping libraries is possible > configure:14914: result: yes > configure:14940: checking if libtool supports shared libraries > configure:14942: result: yes > configure:14945: checking whether to build shared libraries > configure:14966: result: yes > configure:14969: checking whether to build static libraries > configure:14973: result: yes > configure:14996: checking how to run the C++ preprocessor > configure:15023: g++ -E conftest.cpp > configure:15023: $? = 0 > configure:15037: g++ -E conftest.cpp > conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory > configure:15037: $? = 1 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "netCDF" > | #define PACKAGE_TARNAME "netcdf" > | #define PACKAGE_VERSION "4.1.2" > | #define PACKAGE_STRING "netCDF 4.1.2" > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx" > | #define PACKAGE_URL "" > | #define PACKAGE "netcdf" > | #define VERSION "4.1.2" > | #define NCIO_MINBLOCKSIZE 256 > | #define USE_FSYNC 1 > | #define DEFAULT_CHUNK_SIZE 4194304 > | #define MAX_DEFAULT_CACHE_SIZE 67108864 > | #define DEFAULT_CHUNKS_IN_CACHE 10 > | #define CHUNK_CACHE_SIZE 4194304 > | #define CHUNK_CACHE_NELEMS 1009 > | #define CHUNK_CACHE_PREEMPTION 0.75 > | #define USE_DAP 1 > | #define ENABLE_DAP 1 > | #define ENABLE_DAP_REMOTE_TESTS 1 > | #define USE_EXTREME_NUMBERS 1 > | #define TEMP_LARGE "." > | #define HAVE_CURLOPT_KEYPASSWD 1 > | #define STDC_HEADERS 1 > | #define HAVE_SYS_TYPES_H 1 > | #define HAVE_SYS_STAT_H 1 > | #define HAVE_STDLIB_H 1 > | #define HAVE_STRING_H 1 > | #define HAVE_MEMORY_H 1 > | #define HAVE_STRINGS_H 1 > | #define HAVE_INTTYPES_H 1 > | #define HAVE_STDINT_H 1 > | #define HAVE_UNISTD_H 1 > | #define HAVE_DLFCN_H 1 > | #define LT_OBJDIR ".libs/" > | /* end confdefs.h. */ > | #include <ac_nonexistent.h> > configure:15062: result: g++ -E > configure:15082: g++ -E conftest.cpp > configure:15082: $? = 0 > configure:15096: g++ -E conftest.cpp > conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory > configure:15096: $? = 1 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "netCDF" > | #define PACKAGE_TARNAME "netcdf" > | #define PACKAGE_VERSION "4.1.2" > | #define PACKAGE_STRING "netCDF 4.1.2" > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx" > | #define PACKAGE_URL "" > | #define PACKAGE "netcdf" > | #define VERSION "4.1.2" > | #define NCIO_MINBLOCKSIZE 256 > | #define USE_FSYNC 1 > | #define DEFAULT_CHUNK_SIZE 4194304 > | #define MAX_DEFAULT_CACHE_SIZE 67108864 > | #define DEFAULT_CHUNKS_IN_CACHE 10 > | #define CHUNK_CACHE_SIZE 4194304 > | #define CHUNK_CACHE_NELEMS 1009 > | #define CHUNK_CACHE_PREEMPTION 0.75 > | #define USE_DAP 1 > | #define ENABLE_DAP 1 > | #define ENABLE_DAP_REMOTE_TESTS 1 > | #define USE_EXTREME_NUMBERS 1 > | #define TEMP_LARGE "." > | #define HAVE_CURLOPT_KEYPASSWD 1 > | #define STDC_HEADERS 1 > | #define HAVE_SYS_TYPES_H 1 > | #define HAVE_SYS_STAT_H 1 > | #define HAVE_STDLIB_H 1 > | #define HAVE_STRING_H 1 > | #define HAVE_MEMORY_H 1 > | #define HAVE_STRINGS_H 1 > | #define HAVE_INTTYPES_H 1 > | #define HAVE_STDINT_H 1 > | #define HAVE_UNISTD_H 1 > | #define HAVE_DLFCN_H 1 > | #define LT_OBJDIR ".libs/" > | /* end confdefs.h. */ > | #include <ac_nonexistent.h> > configure:15266: checking for ld used by g++ > configure:15333: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld > configure:15340: checking if the linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld > configure:15355: result: no > configure:15410: checking whether the g++ linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries > configure:16414: result: yes > configure:16449: g++ -c -g -O2 conftest.cpp >&5 > configure:16452: $? = 0 > configure:16972: checking for g++ option to produce PIC > configure:16979: result: -fno-common -DPIC > configure:16987: checking if g++ PIC flag -fno-common -DPIC works > configure:17005: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5 > configure:17009: $? = 0 > configure:17022: result: yes > configure:17045: checking if g++ static flag -static works > configure:17073: result: no > configure:17085: checking if g++ supports -c -o file.o > configure:17106: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 > configure:17110: $? = 0 > configure:17132: result: yes > configure:17137: checking if g++ supports -c -o file.o > configure:17184: result: yes > configure:17214: checking whether the g++ linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries > configure:17248: result: yes > configure:17391: checking dynamic linker characteristics > configure:18061: result: darwin10.7.3 dyld > configure:18114: checking how to hardcode library paths into programs > configure:18139: result: immediate > configure:18288: checking if libtool supports shared libraries > configure:18290: result: yes > configure:18293: checking whether to build shared libraries > configure:18313: result: yes > configure:18316: checking whether to build static libraries > configure:18320: result: yes > configure:18624: checking for gfortran option to produce PIC > configure:18631: result: -fno-common > configure:18639: checking if gfortran PIC flag -fno-common works > configure:18657: gfortran -c -g -O2 -fno-common conftest.f >&5 > configure:18661: $? = 0 > configure:18674: result: yes > configure:18697: checking if gfortran static flag -static works > configure:18725: result: no > configure:18737: checking if gfortran supports -c -o file.o > configure:18758: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 > configure:18762: $? = 0 > configure:18784: result: yes > configure:18789: checking if gfortran supports -c -o file.o > configure:18836: result: yes > configure:18866: checking whether the gfortran linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries > configure:19974: result: yes > configure:20117: checking dynamic linker characteristics > configure:20781: result: darwin10.7.3 dyld > configure:20834: checking how to hardcode library paths into programs > configure:20859: result: immediate > configure:21004: checking if libtool supports shared libraries > configure:21006: result: yes > configure:21009: checking whether to build shared libraries > configure:21029: result: yes > configure:21032: checking whether to build static libraries > configure:21036: result: yes > configure:21069: gfortran -c -g -O2 conftest.f90 >&5 > configure:21072: $? = 0 > configure:21484: checking for gfortran option to produce PIC > configure:21491: result: -fno-common > configure:21499: checking if gfortran PIC flag -fno-common works > configure:21517: gfortran -c -g -O2 -fno-common conftest.f90 >&5 > configure:21521: $? = 0 > configure:21534: result: yes > configure:21557: checking if gfortran static flag -static works > configure:21585: result: no > configure:21597: checking if gfortran supports -c -o file.o > configure:21618: gfortran -c -g -O2 -o out/conftest2.o conftest.f90 >&5 > configure:21622: $? = 0 > configure:21644: result: yes > configure:21649: checking if gfortran supports -c -o file.o > configure:21696: result: yes > configure:21726: checking whether the gfortran linker > (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries > configure:22834: result: yes > configure:22977: checking dynamic linker characteristics > configure:23641: result: darwin10.7.3 dyld > configure:23694: checking how to hardcode library paths into programs > configure:23719: result: immediate > configure:23778: finding other utilities > configure:23784: trying to set fortran flags for this platform > configure:23833: checking for special C compiler options needed for large > files > configure:23878: result: no > configure:23884: checking for _FILE_OFFSET_BITS value needed for large files > configure:23909: cc -c -g -O2 conftest.c >&5 > configure:23909: $? = 0 > configure:23941: result: no > configure:24025: displaying some results > configure:24031: checking CPPFLAGS > configure:24033: result: > configure:24035: checking CC CFLAGS > configure:24037: result: cc -g -O2 > configure:24040: checking type cc > configure:24042: result: cc is hashed (/usr/bin/cc) > configure:24045: checking CXX > configure:24048: result: g++ > configure:24050: checking CXXFLAGS > configure:24052: result: -g -O2 > configure:24055: checking type g++ > configure:24057: result: g++ is /usr/bin/g++ > configure:24064: checking FC > configure:24067: result: gfortran > configure:24069: checking FFLAGS > configure:24071: result: -g -O2 > configure:24074: checking type gfortran > configure:24076: result: gfortran is /usr/local/bin/gfortran > configure:24083: checking F90 > configure:24086: result: gfortran > configure:24088: checking FCFLAGS > configure:24090: result: -g -O2 > configure:24093: checking type gfortran > configure:24095: result: gfortran is /usr/local/bin/gfortran > configure:24102: checking AR > configure:24105: result: ar > configure:24107: checking AR_FLAGS > configure:24109: result: cru > configure:24112: checking type ar > configure:24114: result: ar is hashed (/usr/bin/ar) > configure:24121: checking NM > configure:24124: result: /usr/bin/nm > configure:24126: checking NMFLAGS > configure:24128: result: > configure:24200: checking for /usr/bin/nm > configure:24227: result: /usr/bin/nm > configure:24240: checking nm flags > configure:24245: result: > configure:24257: checking for C-equivalent to Fortran routine "SUB" > configure:24264: gfortran -c -g -O2 conftest.f > configure:24267: $? = 0 > configure:24277: result: sub_ > configure:24297: checking for Fortran "byte" > configure:24305: gfortran -c -g -O2 conftest.f > configure:24308: $? = 0 > configure:24310: result: yes > configure:24328: checking for Fortran "integer*2" > configure:24336: gfortran -c -g -O2 conftest.f > configure:24339: $? = 0 > configure:24341: result: yes > configure:24368: checking if Fortran "byte" is C "signed char" > configure:24378: cc -c -g -O2 conftest.c > conftest.c: In function 'sub_': > conftest.c:4: warning: incompatible implicit declaration of built-in function > 'exit' > configure:24381: $? = 0 > configure:24384: gfortran -g -O2 -c conftestf.f > configure:24387: $? = 0 > configure:24390: gfortran -o conftest -g -O2 conftestf.o conftest.o > ld: warning: in conftest.o, file was built for unsupported file format which > is not the architecture being linked (i386) > Undefined symbols: > "_sub_", referenced from: > _MAIN__ in conftestf.o > ld: symbol(s) not found > collect2: ld returned 1 exit status > configure:24393: $? = 1 > configure:24416: error: Could not link conftestf.o and conftest.o > > ## ---------------- ## > ## Cache variables. ## > ## ---------------- ## > > ac_cv_build=x86_64-apple-darwin10.7.3 > ac_cv_c_compiler_gnu=yes > ac_cv_c_const=yes > ac_cv_cxx_compiler_gnu=yes > ac_cv_env_CCC_set= > ac_cv_env_CCC_value= > ac_cv_env_CC_set= > ac_cv_env_CC_value= > ac_cv_env_CFLAGS_set= > ac_cv_env_CFLAGS_value= > ac_cv_env_CPPFLAGS_set= > ac_cv_env_CPPFLAGS_value= > ac_cv_env_CPP_set= > ac_cv_env_CPP_value= > ac_cv_env_CXXCPP_set= > ac_cv_env_CXXCPP_value= > ac_cv_env_CXXFLAGS_set= > ac_cv_env_CXXFLAGS_value= > ac_cv_env_CXX_set= > ac_cv_env_CXX_value= > ac_cv_env_F77_set= > ac_cv_env_F77_value= > ac_cv_env_FCFLAGS_set= > ac_cv_env_FCFLAGS_value= > ac_cv_env_FC_set= > ac_cv_env_FC_value= > ac_cv_env_FFLAGS_set= > ac_cv_env_FFLAGS_value= > ac_cv_env_LDFLAGS_set= > ac_cv_env_LDFLAGS_value= > ac_cv_env_LIBS_set= > ac_cv_env_LIBS_value= > ac_cv_env_build_alias_set= > ac_cv_env_build_alias_value= > ac_cv_env_host_alias_set= > ac_cv_env_host_alias_value= > ac_cv_env_target_alias_set= > ac_cv_env_target_alias_value= > ac_cv_f77_compiler_gnu=yes > ac_cv_fc_compiler_gnu=yes > ac_cv_fc_srcext_f90=none > ac_cv_header_dlfcn_h=yes > ac_cv_header_inttypes_h=yes > ac_cv_header_memory_h=yes > ac_cv_header_stdc=yes > ac_cv_header_stdint_h=yes > ac_cv_header_stdlib_h=yes > ac_cv_header_string_h=yes > ac_cv_header_strings_h=yes > ac_cv_header_sys_stat_h=yes > ac_cv_header_sys_types_h=yes > ac_cv_header_unistd_h=yes > ac_cv_host=x86_64-apple-darwin10.7.3 > ac_cv_objext=o > ac_cv_path_EGREP='/usr/bin/grep -E' > ac_cv_path_FGREP='/usr/bin/grep -F' > ac_cv_path_GREP=/usr/bin/grep > ac_cv_path_SED=/usr/bin/sed > ac_cv_path_install='/usr/bin/install -c' > ac_cv_prog_AWK=awk > ac_cv_prog_CPP='cc -E' > ac_cv_prog_CXXCPP='g++ -E' > ac_cv_prog_NM=/usr/bin/nm > ac_cv_prog_ac_ct_AR=ar > ac_cv_prog_ac_ct_CC=cc > ac_cv_prog_ac_ct_CXX=g++ > ac_cv_prog_ac_ct_DSYMUTIL=dsymutil > ac_cv_prog_ac_ct_F77=gfortran > ac_cv_prog_ac_ct_FC=gfortran > ac_cv_prog_ac_ct_LIPO=lipo > ac_cv_prog_ac_ct_NMEDIT=nmedit > ac_cv_prog_ac_ct_OTOOL=otool > ac_cv_prog_ac_ct_RANLIB=ranlib > ac_cv_prog_ac_ct_STRIP=strip > ac_cv_prog_cc_c89= > ac_cv_prog_cc_cc_c_o=yes > ac_cv_prog_cc_g=yes > ac_cv_prog_cxx_g=yes > ac_cv_prog_f77_g=yes > ac_cv_prog_f90_uppercase_mod=no > ac_cv_prog_fc_g=yes > ac_cv_prog_make_make_set=yes > ac_cv_sys_file_offset_bits=no > ac_cv_sys_largefile_CC=no > ac_cv_target=x86_64-apple-darwin10.7.3 > am_cv_CC_dependencies_compiler_type=gcc3 > am_cv_CXX_dependencies_compiler_type=gcc3 > ax_cv_f90_modflag=-I > lt_cv_apple_cc_single_mod=yes > lt_cv_ar_at_file=no > lt_cv_deplibs_check_method=pass_all > lt_cv_file_magic_cmd='$MAGIC_CMD' > lt_cv_file_magic_test_file= > lt_cv_ld_exported_symbols_list=yes > lt_cv_ld_force_load=no > lt_cv_ld_reload_flag=-r > lt_cv_nm_interface='BSD nm' > lt_cv_objdir=.libs > lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld > lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld > lt_cv_path_NM=/usr/bin/nm > lt_cv_path_mainfest_tool=no > lt_cv_prog_compiler_c_o=yes > lt_cv_prog_compiler_c_o_CXX=yes > lt_cv_prog_compiler_c_o_F77=yes > lt_cv_prog_compiler_c_o_FC=yes > lt_cv_prog_compiler_pic='-fno-common -DPIC' > lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC' > lt_cv_prog_compiler_pic_F77=-fno-common > lt_cv_prog_compiler_pic_FC=-fno-common > lt_cv_prog_compiler_pic_works=yes > lt_cv_prog_compiler_pic_works_CXX=yes > lt_cv_prog_compiler_pic_works_F77=yes > lt_cv_prog_compiler_pic_works_FC=yes > lt_cv_prog_compiler_rtti_exceptions=no > lt_cv_prog_compiler_static_works=no > lt_cv_prog_compiler_static_works_CXX=no > lt_cv_prog_compiler_static_works_F77=no > lt_cv_prog_compiler_static_works_FC=no > lt_cv_prog_gnu_ld=no > lt_cv_prog_gnu_ldcxx=no > lt_cv_sharedlib_from_linklib_cmd='printf %s\n' > lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ > ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 > \2/p'\'' | sed '\''/ __gnu_lto/d'\''' > lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ > {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ > {"\2", (void *) \&\2},/p'\''' > lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ > ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) > \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) > \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' > lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int > \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\''' > lt_cv_sys_max_cmd_len=196608 > lt_cv_to_host_file_cmd=func_convert_file_noop > lt_cv_to_tool_file_cmd=func_convert_file_noop > > ## ----------------- ## > ## Output variables. ## > ## ----------------- ## > > ACLOCAL='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run > aclocal-1.11' > ALLOCA='' > AMDEPBACKSLASH='\' > AMDEP_FALSE='#' > AMDEP_TRUE='' > AMTAR='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run tar' > AR='ar' > AS='as' > AUTOCONF='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run autoconf' > AUTOHEADER='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run > autoheader' > AUTOMAKE='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run > automake-1.11' > AWK='awk' > BINFILE_NAME='' > BUILD_BENCHMARKS_FALSE='' > BUILD_BENCHMARKS_TRUE='#' > BUILD_CDMREMOTE_FALSE='' > BUILD_CDMREMOTE_TRUE='' > BUILD_CXX4_FALSE='' > BUILD_CXX4_TRUE='' > BUILD_CXX_FALSE='#' > BUILD_CXX_TRUE='' > BUILD_C_FALSE='#' > BUILD_C_TRUE='' > BUILD_DAP_FALSE='' > BUILD_DAP_TRUE='' > BUILD_DLL_FALSE='' > BUILD_DLL_TRUE='#' > BUILD_EXAMPLES_FALSE='#' > BUILD_EXAMPLES_TRUE='' > BUILD_F77_FALSE='#' > BUILD_F77_TRUE='' > BUILD_F90_FALSE='#' > BUILD_F90_TRUE='' > BUILD_LIBCF_FALSE='' > BUILD_LIBCF_TRUE='' > BUILD_PARALLEL_FALSE='' > BUILD_PARALLEL_TRUE='' > BUILD_SEPARATE_FORTRAN_FALSE='#' > BUILD_SEPARATE_FORTRAN_TRUE='' > BUILD_UDUNITS_FALSE='' > BUILD_UDUNITS_TRUE='' > BUILD_UTILITIES_FALSE='#' > BUILD_UTILITIES_TRUE='' > BUILD_V2_FALSE='#' > BUILD_V2_TRUE='' > CC='cc' > CCDEPMODE='depmode=gcc3' > CFLAGS='-g -O2' > CPP='cc -E' > CPPFLAGS='' > CROSS_COMPILING_FALSE='' > CROSS_COMPILING_TRUE='' > CURLDIR='/usr' > CURL_CFLAGS='' > CURL_FCFLAGS='' > CURL_FFLAGS='' > CURL_LIBS='-lcurl' > CXX='g++' > CXXCPP='g++ -E' > CXXDEPMODE='depmode=gcc3' > CXXFLAGS='-g -O2' > CYGPATH_W='echo' > DEFS='' > DEPDIR='.deps' > DLLTOOL='false' > DSYMUTIL='dsymutil' > DUMPBIN='' > ECHO_C='\c' > ECHO_N='' > ECHO_T='' > EGREP='/usr/bin/grep -E' > ENABLE_DAP_LONG_TESTS_FALSE='' > ENABLE_DAP_LONG_TESTS_TRUE='' > ENABLE_DAP_REMOTE_TESTS_FALSE='' > ENABLE_DAP_REMOTE_TESTS_TRUE='' > EXEEXT='' > EXTERN_CFLAGS='' > EXTERN_CPPFLAGS='' > EXTERN_LDFLAGS='' > EXTRA_EXAMPLE_TESTS_FALSE='' > EXTRA_EXAMPLE_TESTS_TRUE='' > EXTRA_TESTS_FALSE='' > EXTRA_TESTS_TRUE='#' > F77='gfortran' > FC='gfortran' > FCFLAGS='-g -O2' > FCFLAGS_f90='' > FFLAGS='-g -O2' > FGREP='/usr/bin/grep -F' > FTPBINDIR='' > GREP='/usr/bin/grep' > HAS_CXX='' > HAS_DAP='' > HAS_F77='' > HAS_F90='' > HAS_HDF4='' > HAS_HDF5='' > HAS_NC2='' > HAS_NC4='' > HAS_PNETCDF='' > HAS_SZLIB='' > HDF4DIR='' > HDF5DIR='' > INSTALL_DATA='${INSTALL} -m 644' > INSTALL_PROGRAM='${INSTALL}' > INSTALL_SCRIPT='${INSTALL}' > INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' > INTERNAL_OCLIB_FALSE='#' > INTERNAL_OCLIB_TRUE='' > LARGE_FILE_TESTS_FALSE='' > LARGE_FILE_TESTS_TRUE='#' > LD='/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld' > LDFLAGS='' > LIBOBJS='' > LIBS='' > LIBTOOL='$(SHELL) $(top_builddir)/libtool' > LIPO='lipo' > LN_S='ln -s' > LTLIBOBJS='' > MAKEINFO='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run makeinfo' > MAKEWHATIS_CMD='' > MANIFEST_TOOL=':' > MKDIR_P='./install-sh -c -d' > MOD_FLAG='-I' > NC_FLIBS='' > NC_LIBS='' > NETCDF_C_LIB='' > NM='/usr/bin/nm' > NMEDIT='nmedit' > NMFLAGS='' > OBJDUMP='false' > OBJEXT='o' > OTOOL64=':' > OTOOL='otool' > PACKAGE='netcdf' > PACKAGE_BUGREPORT='support-netcdf@xxxxxxxxxxxxxxxx' > PACKAGE_NAME='netCDF' > PACKAGE_STRING='netCDF 4.1.2' > PACKAGE_TARNAME='netcdf' > PACKAGE_URL='' > PACKAGE_VERSION='4.1.2' > PATH_SEPARATOR=':' > PNETCDFDIR='' > RANLIB='ranlib' > SED='/usr/bin/sed' > SET_MAKE='' > SHELL='/bin/sh' > STRIP='strip' > SZLIBDIR='' > TEST_F77_FALSE='#' > TEST_F77_TRUE='' > TEST_PARALLEL_FALSE='' > TEST_PARALLEL_TRUE='' > UPPER_CASE_MOD_FALSE='' > UPPER_CASE_MOD_TRUE='' > USE_DAP_FALSE='' > USE_DAP_TRUE='' > USE_DISPATCH_FALSE='' > USE_DISPATCH_TRUE='' > USE_FFIO_FALSE='' > USE_FFIO_TRUE='#' > USE_HDF4_DIR_FALSE='' > USE_HDF4_DIR_TRUE='' > USE_HDF4_FALSE='' > USE_HDF4_FILE_TESTS_FALSE='' > USE_HDF4_FILE_TESTS_TRUE='' > USE_HDF4_TRUE='' > USE_HDF5_DIR_FALSE='' > USE_HDF5_DIR_TRUE='' > USE_LOGGING_FALSE='' > USE_LOGGING_TRUE='' > USE_NETCDF4_FALSE='' > USE_NETCDF4_TRUE='' > USE_NETCDF_C_LIB_DIR_FALSE='' > USE_NETCDF_C_LIB_DIR_TRUE='#' > USE_PNETCDF_DIR_FALSE='' > USE_PNETCDF_DIR_TRUE='' > USE_PNETCDF_FALSE='' > USE_PNETCDF_TRUE='' > USE_RENAMEV3_FALSE='' > USE_RENAMEV3_TRUE='' > USE_SZIP_FALSE='' > USE_SZIP_TRUE='' > USE_SZLIB_DIR_FALSE='' > USE_SZLIB_DIR_TRUE='' > USE_VALGRIND_TESTS_FALSE='' > USE_VALGRIND_TESTS_TRUE='' > USE_ZLIB_DIR_FALSE='' > USE_ZLIB_DIR_TRUE='' > VERSION='4.1.2' > WHATIS='' > ZLIBDIR='' > ac_ct_AR='ar' > ac_ct_CC='cc' > ac_ct_CXX='g++' > ac_ct_DUMPBIN='' > ac_ct_F77='gfortran' > ac_ct_FC='gfortran' > am__EXEEXT_FALSE='' > am__EXEEXT_TRUE='' > am__fastdepCC_FALSE='#' > am__fastdepCC_TRUE='' > am__fastdepCXX_FALSE='#' > am__fastdepCXX_TRUE='' > am__include='include' > am__isrc='' > am__leading_dot='.' > am__quote='' > am__tar='${AMTAR} chof - "$$tardir"' > am__untar='${AMTAR} xf -' > bindir='${exec_prefix}/bin' > build='x86_64-apple-darwin10.7.3' > build_alias='' > build_cpu='x86_64' > build_os='darwin10.7.3' > build_vendor='apple' > datadir='${datarootdir}' > datarootdir='${prefix}/share' > docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' > dvidir='${docdir}' > exec_prefix='NONE' > host='x86_64-apple-darwin10.7.3' > host_alias='' > host_cpu='x86_64' > host_os='darwin10.7.3' > host_vendor='apple' > htmldir='${docdir}' > includedir='${prefix}/include' > infodir='${datarootdir}/info' > install_sh='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/install-sh' > libdir='${exec_prefix}/lib' > libexecdir='${exec_prefix}/libexec' > localedir='${datarootdir}/locale' > localstatedir='${prefix}/var' > mandir='${datarootdir}/man' > mkdir_p='$(top_builddir)/./install-sh -c -d' > oldincludedir='/usr/include' > pdfdir='${docdir}' > prefix='/lib' > prog='' > program_transform_name='s,x,x,' > psdir='${docdir}' > sbindir='${exec_prefix}/sbin' > sharedstatedir='${prefix}/com' > subdirs='' > sysconfdir='${prefix}/etc' > target='x86_64-apple-darwin10.7.3' > target_alias='' > target_cpu='x86_64' > target_os='darwin10.7.3' > target_vendor='apple' > > ## ----------- ## > ## confdefs.h. ## > ## ----------- ## > > /* confdefs.h */ > #define PACKAGE_NAME "netCDF" > #define PACKAGE_TARNAME "netcdf" > #define PACKAGE_VERSION "4.1.2" > #define PACKAGE_STRING "netCDF 4.1.2" > #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx" > #define PACKAGE_URL "" > #define PACKAGE "netcdf" > #define VERSION "4.1.2" > #define NCIO_MINBLOCKSIZE 256 > #define USE_FSYNC 1 > #define DEFAULT_CHUNK_SIZE 4194304 > #define MAX_DEFAULT_CACHE_SIZE 67108864 > #define DEFAULT_CHUNKS_IN_CACHE 10 > #define CHUNK_CACHE_SIZE 4194304 > #define CHUNK_CACHE_NELEMS 1009 > #define CHUNK_CACHE_PREEMPTION 0.75 > #define USE_DAP 1 > #define ENABLE_DAP 1 > #define ENABLE_DAP_REMOTE_TESTS 1 > #define USE_EXTREME_NUMBERS 1 > #define TEMP_LARGE "." > #define HAVE_CURLOPT_KEYPASSWD 1 > #define STDC_HEADERS 1 > #define HAVE_SYS_TYPES_H 1 > #define HAVE_SYS_STAT_H 1 > #define HAVE_STDLIB_H 1 > #define HAVE_STRING_H 1 > #define HAVE_MEMORY_H 1 > #define HAVE_STRINGS_H 1 > #define HAVE_INTTYPES_H 1 > #define HAVE_STDINT_H 1 > #define HAVE_UNISTD_H 1 > #define HAVE_DLFCN_H 1 > #define LT_OBJDIR ".libs/" > #define pgiFortran 1 > #define NF_INT1_T byte > #define NF_INT2_T integer*2 > > configure: exit 1 > _______________________________________________ > netcdfgroup mailing list > netcdfgroup@xxxxxxxxxxxxxxxx > For list information or to unsubscribe, visit: > http://www.unidata.ucar.edu/mailing_lists/ ********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected"
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