[netcdfgroup] undefined references

• To: NetCDF Group <netcdfgroup@xxxxxxxxxxxxxxxx>
• Subject: [netcdfgroup] undefined references
• From: Letitia Soulliard - NOAA Affiliate <letitia.soulliard@xxxxxxxx>
• Date: Wed, 29 Jan 2014 16:23:47 -0500

I'm trying to compile my code on a linux machine with pgcc/pgf90 using
netCDF netcdf-4.2.1.1/ and
netcdf-fortran-4.2/.  My code is FORTRAN 90.

I am getting the following errors... and I'm totally stumped as to what is
causing the problem.

I've compiled this successfully on another machine, but that machine died.
 So I've had to re-install hdf5 and netcdf4 as well as my code.

pgf90 -m64 -Bstatic -g77libs -byteswapio  main_nucaps_ccr_to_netcdf.o
-I/disk1/pub/letitias/util/netcdf-4/include
-I/disk1/pub/letitias/util/hdf5/include -I../allocate
-I../netcdf_readwrite_f90 -I../include -I../subset -I../modules
-I../netcdf_utils_f90 -I../subset_level1c_products -I../pc -I../dem
-I../global_grids -I../matchups -I../level2 -I../time -I../grib -I../wesley
-I../monitoring -I../futils -I../hdf5_f90  -L../allocate -lallocate
-L/disk1/pub/letitias/util/netcdf-4/lib -lnetcdf -lnetcdff
-L../netcdf_readwrite_f90 -lnetcdf_readwrite_f90 -L../include -linclude
-L../subset -lsubset -L../modules -lmodules -L../netcdf_utils_f90
-lnetcdf_utils_f90 -L../subset_level1c_products -lsub_prod -L../pc -lpc
-L../dem -ldem -L../global_grids -lglobal_grids -L../matchups -lmatchups
-L../level2 -llevel2 -L../monitoring -lmonitoring -L../time -lwwwtime
-L../grib -lgrib -L../wesley -lwesley -L../futils -lfutils -L../hdf5_f90
-lhdf5_f90 -L/disk1/pub/letitias/util/netcdf-4/lib -lnetcdf -lnetcdff
-L/disk1/pub/letitias/util/hdf5/lib -lhdf5hl_fortran -lhdf5_hl
-lhdf5_fortran -lhdf5 -lz -lm  -o main_nucaps_ccr_to_netcdf
/disk1/pub/letitias/util/netcdf-4/lib/libnetcdff.a(fort-attio.o): In
function `nf_put_att_text_':
/disk1/pub/letitias/util/netcdf-4/netcdf-fortran-4.2/fortran/./fort-attio.c:15:
undefined reference to `nc_put_att_text'
/disk1/pub/letitias/util/netcdf-4/lib/libnetcdff.a(fort-attio.o): In
function `nf_get_att_text_':
/disk1/pub/letitias/util/netcdf-4/netcdf-fortran-4.2/fortran/./fort-attio.c:22:
undefined reference to `nc_get_att_text'
/disk1/pub/letitias/util/netcdf-4/lib/libnetcdff.a(fort-attio.o): In
function `nf_put_att_int1_':
/disk1/pub/letitias/util/netcdf-4/netcdf-fortran-4.2/fortran/./fort-attio.c:30:
undefined reference to `nc_put_att_schar'

The errors continue like that for quite a while.  The end of the error
message looks like...

/disk1/pub/letitias/util/netcdf-4/netcdf-fortran-4.2/fortran/./fort-nc4.c:232:
undefined reference to `nc_set_var_chunk_cache_ints'
/disk1/pub/letitias/util/netcdf-4/lib/libnetcdff.a(fort-nc4.o): In function
`nf_get_var_chunk_cache_':
/disk1/pub/letitias/util/netcdf-4/netcdf-fortran-4.2/fortran/./fort-nc4.c:234:
undefined reference to `nc_get_var_chunk_cache_ints'
make: *** [main_nucaps_ccr_to_netcdf] Error 2

Thanks,
Tish Soulliard

NOAA/NESDIS/STAR

letitia.soulliard@xxxxxxxx
301-683-3538

National Oceanic and Atmospheric Administration
NESDIS/STAR/SMCD/OPDB
Letitia Soulliard
NCWCP (E/RA23)
5830 University Research Court
Floor 2, Room 2686
College Park, MD 20740-3818

• Follow-Ups:
  • Re: [netcdfgroup] undefined references
    • From: Nick Papior Andersen