Re: [netcdfgroup] nccopy fails with corrupted double link list

• To: netcdfgroup@xxxxxxxxxxxxxxxx
• Subject: Re: [netcdfgroup] nccopy fails with corrupted double link list
• From: "ashwinD12 ." <winash12@xxxxxxxxx>
• Date: Fri, 24 Jun 2016 12:17:11 +0530

Running this via python gives a more accurate location of where the error
is happening -

it is on line 1348 in nccopy.c i.e  NC_CHECK(nc_open(infile, open_mode,
&igrp));



On Fri, Jun 24, 2016 at 11:55 AM, ashwinD12 . <winash12@xxxxxxxxx> wrote:

> I don't mind upgrading to netcdf 4.4.4 or 4.4.3 but will that fix the
> problem ? Searching the archives I could not see anyone report this problem.
>
> On Fri, Jun 24, 2016 at 11:45 AM, ashwinD12 . <winash12@xxxxxxxxx> wrote:
>
>> Hello,
>>            I am getting this error(this never happened before) when I run
>> nccopy today
>>
>> ncopy -k 4 "
>> http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis/pressure/air.2014.nc?air[524:524][0][34:20][26:40],time[524:524],level[0],lat[34:20],lon[26:40]";
>> air_1000_2014_12_5_00Z.nc
>>
>> I get *** Error in 'nccopy' : corrupted double-linked list:
>> 0x000000000000b3a430 ***
>>
>> core dumped
>>
>> I checked for this error online and it appears to be related to glibc but
>> I have not changed that recently.
>>
>> I am using netcdf 4.3.2 and I am on Ubuntu 14.04 and I compiled netcdf
>> with icc.
>>
>> When I do a regular nccopy from one file to another that works -
>>
>> i.e. nccopy a.nc b.nc. It is only when it has to do a network call it
>> appears to be failing. Any suggestions ?
>>
>> Regards.
>> Ashwin.
>>
>
>

• References:
  • [netcdfgroup] nccopy fails with corrupted double link list
    • From: ashwinD12 .
  • Re: [netcdfgroup] nccopy fails with corrupted double link list
    • From: ashwinD12 .