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Ward, Ah, okay. As you suggested, I have installed parallel-netcdf 1.6.1 now and rebuilt netcdf-4.4.0. Make check now passes all tests. Thanks for the quick answer. Matt On Thu, Jul 7, 2016 at 2:04 PM, Ward Fisher <wfisher@xxxxxxxx> wrote: > Hi Matt, > > Just to chime in real quick, parallel-netcdf 1.7.0 made some changes that > results in these errors; your best bet for the time being will be to roll > back to the latest pre-1.7.0 version. > > I hope this helps, > > -Ward > > On Thu, Jul 7, 2016 at 11:59 AM, Matthew Brown <brownm12@xxxxxx> wrote: > >> Hello, >> >> I am trying to build netcdf/4.4.0 as a dependency for I/O API and CMAQ >> models on a parallel-capable cluster. I am using compiler PGI/13.8 and MPI >> implementation MVAPICH2/1.9a2 on a CentOS Linux platform. >> >> Running make check (logs attached, split into 3 files b/c the run was >> interrupted) results in failures indicating "Numeric conversion not >> representable" for uchar types. The errors say to check the >> nc-test/test-suite.log file which is also attached here. Information about >> my build is included below. >> >> 1. Can someone help me with these errors? Ideally, I'd like to resolve >> them, but I could settle for being convinced that the errors are not >> important. >> >> 2. I also need to build/install netcdf-fortran and have used the >> experimental configure switch to do this... how do I know if it worked? >> >> Thanks for any help you can provide, >> >> Matt >> >> >> BUILD INFO: >> I have built parallel-netcdf/1.7.0 and hdf5/1.8.15 with the same compiler >> and MPI and am linking to their library and include directories. >> >> I ran configure from a separate build directory using: >> >> SZIP_INC=[--system path--]/pgi13_8/szip/2.1/include >> SZIP_LIB=[--system path--]/pgi13_8/szip/2.1/lib >> HDF5_INC=[ --local path --]/hdf5/build/hdf5/include >> HDF5_LIB=[ --local path --]/hdf5/build/hdf5/lib >> PNETCDF_INC=[ --local path --]/pnetcdf/install/include >> PNETCDF_LIB=[ --local path --]/pnetcdf/install/lib >> CXX=mpicxx F77=mpif77 F90=mpif90 FC=mpif90 CC=mpicc \ >> CPPFLAGS="-I$HDF5_INC -I$SZIP_INC -I$PNETCDF_INC" \ >> LDFLAGS="-L$HDF5_LIB -L$SZIP_LIB -L$PNETCDF_LIB" \ >> ../netcdf-4.4.0/configure \ >> --prefix="/home/brownm12/deq/CMAS/br/netcdf/install/netcdf-4.4.0/" >> --enable-pnetcdf \ >> --disable-shared --enable-remote-fortran-bootstrap --disable-extra-tests\ >> | tee MYCONFIGLOG >> >> The output from running configure is attached as the file MYCONFIGLOG. >> >> _______________________________________________ >> NOTE: All exchanges posted to Unidata maintained email lists are >> recorded in the Unidata inquiry tracking system and made publicly >> available through the web. Users who post to any of the lists we >> maintain are reminded to remove any personal information that they >> do not want to be made public. >> >> >> netcdfgroup mailing list >> netcdfgroup@xxxxxxxxxxxxxxxx >> For list information or to unsubscribe, visit: >> http://www.unidata.ucar.edu/mailing_lists/ >> > >
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