[netcdfgroup] netCDF Operators NCO version 4.6.9 are released

• To: NCO Announce Mail List <nco-announce@xxxxxxxxxxxxxxxxxxxxx>, netCDF Mail List <netcdfgroup@xxxxxxxxxxxxxxxx>
• Subject: [netcdfgroup] netCDF Operators NCO version 4.6.9 are released
• From: Charlie Zender <zender@xxxxxxx>
• Date: Mon, 18 Sep 2017 16:02:23 -0700

The netCDF Operators NCO version 4.6.9 are released.

http://nco.sf.net (Homepage, Mailing lists)
http://github.com/nco (Source Code, Releases, Developers)

What's new?
Version 4.6.9 fixes a few issues has no new major features.
Most improvements relate to CDF5 handling and CMake builds.
Also, ncks now prints CDL by default.

I shelved my plans to skip 4.6.9 because we discovered a
consequential bug with the netCDF CDF5 implementation.
This led to a flurry of mini-features to diagnose and warn
users who might inadvertently stumble on corrupt CDF5 data.
Understanding the ramifications of this CDF5 bug is ongoing.
The best case scenario now, after a month of investigation,
is that Unidata will soon declare the bug solved and put the
appropriate patches in netCDF 4.5.0. We may make final
adjustments to diagnose/handle CDF5 issues based on those
patches, and release NCO 4.7.0 soon thereafter.

Work on NCO 4.7.0 has commenced. Planned changes include
better diagnosis and workarounds for the netCDF CDF5 bug,
and more ncclimo and ncremap features, and CMake polishing.

Enjoy,
Charlie

NEW FEATURES (full details always in ChangeLog):

A. CDF5: NCO warns when CDF5 files may be corrupted by the newly
   discovered (!) netCDF CDF5 bug: http://nco.sf.net#bug_cdf5

B. CDF5: All NCO operators now fully support CDF5.
   Previously some operators would not output it.
   Now, all output CDF5 with the -5 switch:
   ncra -5 in*.nc out.nc
   This includes auto-conversion.
   ncks converts among netCDF's five-different binary formats:
   ncks [-3 -4 -5 -6 -7] in.nc out.nc
   http://nco.sf.net/nco.html#autoconversion

C. CDF5: In support of detecting the CDF5 bug, and also for more
   general use, are new ncks features to print, in CDL comments,
   the uncompressed RAM size of every variable (when dbg_lvl >= 1).
   When dbg_lvl >= 2, the RAM size of all the data in a file,
   and the variable ID of each variable, are also printed.
   ncks -D 1 -v one ~/nco/data/in.nc
   ncks -D 2 -v one ~/nco/data/in.nc
   ncks -M -D 2 -v one ~/nco/data/in.nc
   http://nco.sf.net#cdl

D. Pedro Vicente has generously contributed a CMake build-engine.
   CMake can build NCO on any architecture, including MS Windows,
   and makes available nearly all important features, including ncap2,
   GSL, DAP, and UDUnits2. A few esoteric NCO features (intrinsic math
   functions like erf(),erff(),gamm()...) remain to be implemented.
   Please give us feedback on any wrinkles in the CMake build.
   To build with CMake and install in /usr/local:
   cd nco/cmake
   cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local
   make
   sudo make install
   Additional examples in cmake/build.bat
   http://nco.sf.net#bld

E. ncks now prints CDL by default.
   Advance notice of this change was first given in May.
   Use the --trd switch to print with "traditional" syntax:
   ncks in.nc
   ncks --trd in.nc
   http://nco.sf.net/nco.html#trd
   http://nco.sf.net/nco.html#cdl

F. ncclimo and ncremap have changes "under-the-hood".
   E3SM/ACME users may notice cosmetic differences.
   Hard-coded paths on DOE machines can now be avoided by
   export NCO_PATH_OVERRIDE='No'
   in the shell where ncclimo/ncremap are invoked.
   http://nco.sf.net/nco.html#ncclimo

BUG FIXES:

A. ncclimo false-positive messages about 'ANN' eliminated

B. ncclimo/ncremap updated udunits2 module for edison

Full release statement at http://nco.sf.net/ANNOUNCE

--
Charlie Zender, Earth System Sci. & Computer Sci.
University of California, Irvine 949-891-2429 )'(