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Happy Thanksgiving Nathan, -Roy On Nov 27, 2008, at 10:01 AM, Nathan Potter wrote:
Isn't the JVM heap a capped at 2GB for 32-bit operating systems/JVM's? On Nov 27, 2008, at 7:19 AM, Roy Mendelssohn wrote:I do believe THREDDS does all f its work in memory, if so you have togreatly increase the java hep settings. We run at 1500Mb and still run into this. I would be curious to know if even with a very large heap size if file sof tha size can be successfully transferred. -Roy On Nov 27, 2008, at 7:11 AM, Heiko Klein wrote:Hi, I use thredds as opendap server for some large netcdf-files (CF-1.0, size > 1.1GB). When selecting to download the whole file with the 'Get ASCII' or 'GET BINARY', thredds crashes with a 'Java heap error'.I'm currently using a default memory setup, i.e. -Xmx512MB for tomcat. How much memory will I need to avoid this problem. Does DODS read thewhole file at once or variable after variable, or even slice after slice? Or are there some adjustments I can make to reduce memory consumption? Best regards, Heiko Details: DODServlet ERROR (anyExceptionHandler): java.lang.OutOfMemoryError: Java heap space ReqState: serverClassName: 'thredds.server.opendap.NcDODSServlet' dataSet: 'XXXX.nc' requestSuffix: 'ascii' CE: '' compressOK: true InitParameters: DebugOn: '' maxNetcdfFilesCached: '10' java.lang.OutOfMemoryError: Java heap space at ucar.nc2.N3raf.readData(N3raf.java:77) at ucar.nc2.N3iosp.readData(N3iosp.java:159) at ucar.nc2.NetcdfFile.readData(NetcdfFile.java:1374) at ucar.nc2.Variable._read(Variable.java:923) at ucar.nc2.Variable.read(Variable.java:618) at thredds.server.opendap.NcSDArray.read(NcSDArray.java:102) at thredds.server.opendap.NcSDGrid.read(NcSDGrid.java:59) at opendap.servlet.AsciiWriter.writeAsc(AsciiWriter.java:95) at opendap.servlet.AsciiWriter.toASCII(AsciiWriter.java:56) at opendap.servlet.AbstractServlet.doGetASC(AbstractServlet.java:1029) at opendap.servlet.AbstractServlet.doGet(AbstractServlet.java: 1630) at thredds.server.opendap.NcDODSServlet.doGet(NcDODSServlet.java:269) at javax.servlet.http.HttpServlet.service(HttpServlet.java:698) at javax.servlet.http.HttpServlet.service(HttpServlet.java:803) ... Thredds-Version: Built-By: caron Built-On: 2008-02-20 22:56:05 Implementation-Title: THREDDS Data Server Implementation-Version: 3.16.33 Implementation-Vendor: UCAR/Unidata Running on tomcat 6.0.16 with jdk.1.6.0_04 on debian 4.0. -- Dr. Heiko Klein Tel. + 47 22 96 32 58 Development Section / IT Department Fax. + 47 22 69 63 55 Norwegian Meteorological Institute http://www.met.no P.O. Box 43 Blindern 0313 Oslo NORWAY _______________________________________________ thredds mailing list thredds@xxxxxxxxxxxxxxxx For list information or to unsubscribe, visit: http://www.unidata.ucar.edu/mailing_lists/********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" _______________________________________________ thredds mailing list thredds@xxxxxxxxxxxxxxxx For list information or to unsubscribe, visit: http://www.unidata.ucar.edu/mailing_lists/= = = Nathan Potter ndp at opendap.org OPeNDAP, Inc. 541.752.1852
**********************"The contents of this message do not reflect any position of the U.S. Government or NOAA."
********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected"
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