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Re: [thredds] thredds4.5 and Feature Collections

>From Roy:

Okay I may have made a little headway on featureCollections in thredds4.5,
though I think it is due to some random changes rather than any understanding.
Since on the real server the featureCollection will be changing,  I am trying
to see if I can make it dynamic.  So I have installed the TDM, and now don’t
understand what it is doing.  I have modified the /tomcat-user.xml  just as in
the instructions, to be:

> <tomcat-users>
>   <role ... />
>   <role rolename="tdsTrigger"/>
>   <user ... />
>   <user username="tdm" password="secret" roles="tdsTrigger"/>
> </tomcat-users>

and I have created a shell script with the line:

> /usr/local/jre1.7.0_25/bin/java -Xmx800m
> -Dtds.content.root.path=/usr/local/tomcat/content -jar tdm-4.5.jar -tds
> "http:/localhost:8080" -showOnly

Now according to the web page, the -showOnly does:

> -showOnly: (optional) if this is present, just show the featureCollections
> that will be indexed and exit.

When I run it I get:

> Server added http://localhost:8080/
> contentDir=/usr/local/tomcat/content
> catalog=/usr/local/tomcat/content/thredds/catalog.xml
> Server added http:/localhost:8080
>
> Enter password for tds trigger: secret
>
> Password = 'secret' OK (Y/N)?y
> Tdm startup at Thu Oct 30 17:43:35 PDT 2014
> Feature Collection names:
>  FNMOC NAVGEM 0.5-degree 6-hourly Pressure
>
> Triggers:
>  thredds/admin/collection/trigger?trigger=never&collection=FNMOC NAVGEM
> 0.5-degree 6-hourly Pressure

and then it hangs there and doesn’t exit - the test file set is only like 10
files and has already been scanned.  Should not TDM have exited?  Even more,
can I exit it and then will it be called, or do I just leave it running or
what.

Thanks for any help.

-Roy


Hi Roy:

1) not sure if -showOnly works as advertised, i will check.

2) what does your <tdm> emelent say about that dataset? if it has a
rescan, it will never exit, so you just kill it.

3) best to give your colelction a name with no blanks in it, eg:

<collection name="FNMOC-NAVGEM"
spec="/u00/FNMOC/NAVGEM/pressure/**/US058GMET-GR1mdl.0018_0056_00000F0..#yyyyMMddHH#_0102_000000-000000pres$"
                   olderThan="5 min"/>

3) check your logs files,  in the tdm working directory (by
convention, "content/tdm") <collection_name>.log. It should say whats
going on. Send it along if not clear what its doing.


John



On Sun, Nov 2, 2014 at 4:25 PM, John Caron <caron@xxxxxxxx> wrote:

>
>    - *To*: thredds@xxxxxxxxxxxxxxxx <thredds@DOMAIN.HIDDEN>
>    - *Subject*: [thredds] thredds4.5 and Feature Collections
>    - *From*: Roy Mendelssohn - NOAA Federal <roy.mendelssohn@xxxxxxxx
>    <roy.mendelssohn@DOMAIN.HIDDEN>>
>    - *Date*: Thu, 30 Oct 2014 16:17:36 -0700
>
> Hi All:
>
> Nothing like FeatureCollections to help one feel old and slow - and boy do I
> feel old and slow.  I have been putting off upgrading to thredds 4.5 just
> because of the changes  (I had enough trouble getting featureCollections
> working the first time around).
>
> I have a working thredds4.3 feature collection that is failing with thredds4.5
> on my test server on my laptop.  So, though what is wrong is probably obvious,
> it hasn’t been obvious to me, nor to my bum knee.  So here goes.
>
> 1.  Do I understand correctly that a featureCollection will only work in
> thredds4.5 with TDM running, or is that only if the dataset is being updated?
>
> -> only if the dataset is changing.
>
> 2.  If I look at:
> http://www.unidata.ucar.edu/software/thredds/current/tds/UpgradingTo4.5.html
>
> I see:
>
>  <update startup="nocheck" trigger="allow"/>
>  <tdm startup="true" rescan="0 8,23,38,53 * * * ? *" trigger="allow"/>
> replaced with:
>
>   <update startup="never" trigger="allow"/>
>   <tdm rewrite="test" rescan="0 8,23,38,53 * * * ? *" trigger="allow"/>
> I had update on startup before  (more below) does it need to be “never” always
> (or basically I am unclear in what sense one  replaces the other).  I didn’t
> have an update command, just
>
>        <tdm startup="true" rescan="0 0/15 * * * ? *" trigger="allow"/>
>
>
> ->
>
> 1)
>
>  <tdm startup ..>
>
> is now
>
>  <tdm rewrite ..>
>
> although it still accepts "startup". just thought it was clearer.
>
> 2)
>
> <update startup="nocheck" ...
>
> means, on TDS startup,  use indices  if they are already there (dont check if 
> they are up to date), and create them if not
>
> <update startup="never"  ...
>
> means, on TDS startup,  indices must be already there, never create them.
>
> I have looked at the logs and it is unclear to me what is causing the
> error. Below I have put what I hope are the relevant parts of the the
> catalogs. If someone can point out the problem, I would be most grateful.
>
> -Roy
>
> thredds4.3:
>
>      <featureCollection name="FNMOC NAVGEM 0.5-degree 6-hourly Pressure"
> featureType="GRIB" harvest="true" path="FNMOC/navgem/pressure/6hr">
>        <dataFormat>GRIB-1</dataFormat>
>        <metadata inherited="true">
>           <serviceName>all</serviceName>
>           <documentation type="summary">
>               FNMOC 1-degree pressure fields from the NOGAPS model
>            </documentation>
>        </metadata>
>
>        <collection
> spec="/u00/FNMOC/NAVGEM/pressure/**/US058GMET-GR1mdl.0018_0056_00000F0..#yyyyMMddHH#_0102_000000-000000pres$"
>                    olderThan="5 min"/>
>        <tdm startup="true" rescan="0 0/15 * * * ? *" trigger="allow"/>
>        <gribConfig datasetTypes="Best LatestFile" />
>      </featureCollection>
>
> thredds4.5:
>
>      <featureCollection name="FNMOC NAVGEM 0.5-degree 6-hourly Pressure"
> featureType="GRIB1" harvest="true" path="FNMOC/navgem/pressure/6hr">
>        <dataFormat>GRIB-1</dataFormat>
>        <metadata inherited="true">
>           <serviceName>all</serviceName>
>           <documentation type="summary">
>               FNMOC 1-degree pressure fields from the NOGAPS model
>            </documentation>
>        </metadata>
>
>        <collection
> spec="/u00/FNMOC/NAVGEM/pressure/**/US058GMET-GR1mdl.0018_0056_00000F0..#yyyyMMddHH#_0102_000000-000000pres$"
>                    olderThan="5 min"/>
>         <update startup="never" trigger="allow"/>
>        <tdm rewrite="test" rescan="0 0/15 * * * ? *" trigger="allow"/>
>        <gribConfig datasetTypes="TwoD Best LatestFile" />
>      </featureCollection>
>
>
>
> -> dont see anything obvious, whats the error message? what does 
> catalogInit.log look like?
>
>
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