Re: [netcdf-hdf] compiling error

• To: winthan <keshunli@xxxxxxxxx>
• Subject: Re: [netcdf-hdf] compiling error
• From: Ed Hartnett <ed@xxxxxxxxxxxxxxxx>
• Date: Thu, 14 Jan 2010 09:27:04 -0700

winthan <keshunli@xxxxxxxxx> writes:

> hi ed,
> ÃÂÂÃÂÂÃÂÂÃÂÂÃÂÂÃÂÂÃÂÂÃÂÂthanks ed. i got it compiledÃÂÂby settingÃÂÂCPPFLAGS. 
> i use the
> following information to configure the hdf src and netcdf src.
> hdf installation
> ------------------------
> ./configure --enable-parallel
> --with-zlib=/apps/rhel5/graphics/x86_64/intel/11.1.038/szip/lib
> --prefix=/usr/rmt_share/scratch95/w/wwinthan/pnetcdf/ --disable-f90
> netcdf installation
> --------------------------
> ÃÂÂ./configure --enable-netcdf-4
> --prefix=/usr/rmt_share/scratch95/w/wwinthan/pnetcdf/netcdf-4.0.1
> --with-hdf5=/usr/rmt_share/scratch95/w/wwinthan/pnetcdf/ --disable-f90
> --with-zlib=/apps/rhel5/graphics/x86_64/intel/11.1.038/szip/lib
> ÃÂÂ
> I got the following run-time error as follow
> ÃÂÂ
> ÃÂÂ
> ../utilities.cpp:(.text+0xf3d): undefined reference to `nc_create_par'
> ../utilities.cpp:(.text+0xf61): undefined reference to `nc_def_dim'
> ../utilities.cpp:(.text+0xf8b): undefined reference to `nc_def_dim'
> ../utilities.cpp:(.text+0xfba): undefined reference to `nc_def_var'
> ../utilities.cpp:(.text+0xfd2): undefined reference to `nc_enddef'
> ../utilities.cpp:(.text+0x110e): undefined reference to
> `nc_var_par_access'
> ../utilities.cpp:(.text+0x1140): undefined reference to
> `nc_put_vara_double'
> ../utilities.cpp:(.text+0x1158): undefined reference to `nc_close'
> thanks
> winthan

Howdy!

Try configuring with --disable-cxx to turn of the c++ api.

I also note that you seen to be pointing --with-zlib= at an szlib
library. Make sure it points to a directory in which netCDF can find
lib/libz.a.

Thanks,

Ed
-- 
Ed Hartnett  -- ed@xxxxxxxxxxxxxxxx

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