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NOTICE: This version of the NSF Unidata web site (archive.unidata.ucar.edu) is no longer being updated.
Current content can be found at unidata.ucar.edu.
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Yes, our testing occasionally deliberately tests for failures. So you can ignore this error. Marston Sheldon Johnston wrote:
Hi, I ran make check om my Linux cluster (Redhat) with the following configuration:./configure --prefix=/home/sm_marst/SOFTWARE --enable-separate-fortran --disable-shared --with-hdf5=/home/sm_marst/SOFTWARE --with-udunits --with-zlib=/usr/lib64 --enable-netcdf-4 --enable-docs-install --enable-extra-example-tests --enable-extra-tests CC=icc --enable-large-file-tests --with-temp-large=/nobackup/rossby14/sm_marst/tmp FC=ifort F77=ifort CXX=icpcand I got the error below. What is strange is that the test says passed at the end. Is this what it's suppose to do? Thanks, /Marston *** Testing HDF5/NetCDF-4 interoperability... *** Creating a HDF5 file with one var with two dimension scales...ok. *** Checking that HDF5 file can be read by netCDF-4, and adding an att...ok . *** Checking that one var, two dimscales, one att file can still be read by HDF5...ok. *** Creating a HDF5 file with one var and no dimension scales...ok. HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value *** Creating a HDF5 file with one var and no dimension scales, without creation ordering...ok. HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0: #000: H5O.c line 676 in H5Oget_info_by_idx(): group not found major: Symbol table minor: Object not found #001: H5Gloc.c line 578 in H5G_loc_find_by_idx(): can't find object major: Symbol table minor: Object not found #002: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #003: H5Gtraverse.c line 801 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Can't move to next iterator location #004: H5Gloc.c line 509 in H5G_loc_find_by_idx_cb(): link not found major: Symbol table minor: Object not found #005: H5Gobj.c line 1108 in H5G_obj_lookup_by_idx(): no creation order index to query major: Symbol table minor: Bad value *** Creating a HDF5 file with two vars and no dimension scales, without creation ordering...ok. *** Creating a HDF5 file with fixed length string...ok. *** Checking a HDF5 file with scalar, fixed-length string dataset...ok. *** Tests successful! PASS: tst_interops- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Marston S. Johnston e-mail: marston@xxxxxxxxxxx ~ ~ Doctoral Student Radio and Space Science ~ ~ Chalmers Technical University http://www.chalmers.se ~~ Gothenburg Tel. (46) 31 772 2235 ~ ~ Sweden Skype ID marston.johnston ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _______________________________________________ netcdfgroup mailing list netcdfgroup@xxxxxxxxxxxxxxxxFor list information or to unsubscribe, visit: http://www.unidata.ucar.edu/mailing_lists/
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