[netcdfgroup] NetCDF-C make check error (v4.5.0 RC2)

• To: netcdfgroup <netcdfgroup@xxxxxxxxxxxxxxxx>
• Subject: [netcdfgroup] NetCDF-C make check error (v4.5.0 RC2)
• From: "Thiago V. dos Santos" <dossa013@xxxxxxx>
• Date: Wed, 27 Sep 2017 20:56:30 -0400

Dear list members,

I am trying to build the netCDF-C libraries v4.5.0 RC2 with parallel
support on a Quadcore Macbook Pro with 16GB RAM running macOS Sierra (OS X
10.12.6).

I am using MacPorts to install both GCC 7.0 and MPICH v3.2.

I then compiled udunits, zlib, PnetCDF and HDF5 all successfully, with all
tests passing. Particularly, this is how I built HDF5 v1.10.1:


# define environment variables
export DYLD_LIBRARY_PATH=/usr/local/cesm-software/lib

./configure FC=mpif90 CC=mpicc CXX=mpicxx --prefix=/usr/local/cesm-software
--enable-parallel --with-zlib=/usr/local/cesm-software
make; sudo make install; sudo make check-install


As I mentioned before, all HDF5 tests finished successfully. And this is
how I am trying to build the ncetcdf-c libraries:


# define environment variables
export UTILDIR="/usr/local/cesm-software"

./configure CC=mpicc FC=mpif90 F77=mpif90 --prefix=/usr/local/cesm-software
--disable-dap --disable-shared --enable-pnetcdf --enable-parallel-tests
CPPFLAGS="-DgFortran -I${UTILDIR}/include" LDFLAGS="-L${UTILDIR}/lib"
LIBS="-lhdf5_hl -lhdf5 -lz -ldl -lm"
make; sudo make install; sudo make check


The configure and make commands apparently finish successfully, but all 27
make-check tests fail. Please see both config.log and test-suite.log
attached to this message.

Based on the information I provided, does anyone have any tips on what can
be causing the tests to fail and how to fix it?

Thanks in advance,
Thiago.
-- 
*Thiago Veloso dos Santos*
*PhD student*
*Land and Atmospheric Science*
*University of Minnesota*

Attachment: config.log
Description: Binary data

Attachment: test-suite.log
Description: Binary data

• Follow-Ups:
  • Re: [netcdfgroup] NetCDF-C make check error (v4.5.0 RC2)
    • From: Fabrício Zimmerer Murta