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NOTICE: This version of the NSF Unidata web site (archive.unidata.ucar.edu) is no longer being updated.
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Hello Thiago!I suggest you to always golf your commands with && instead of ; (semicolon). This will ensure the next command won't run if the previous failed. i.e.:
make && sudo make install && sudo make check-installSo you may be having failure during make or make install, yet you're trying to make check. I see all exit status on your test run is 139 (segmentation fault).
If a failure is happening during `make`, which may be the case, then the two log files you provided wouldn't have meaningful information. At least I'm not familiar with all tests resulting in segmentation fault (instead of file not found or something else).
- fabricio On 9/27/2017 9:56 PM, Thiago V. dos Santos wrote:
Dear list members,I am trying to build the netCDF-C libraries v4.5.0 RC2 with parallel support on a Quadcore Macbook Pro with 16GB RAM running macOS Sierra (OS X 10.12.6).I am using MacPorts to install both GCC 7.0 and MPICH v3.2.I then compiled udunits, zlib, PnetCDF and HDF5 all successfully, with all tests passing. Particularly, this is how I built HDF5 v1.10.1:# define environment variables export DYLD_LIBRARY_PATH=/usr/local/cesm-software/lib./configure FC=mpif90 CC=mpicc CXX=mpicxx --prefix=/usr/local/cesm-software --enable-parallel --with-zlib=/usr/local/cesm-softwaremake; sudo make install; sudo make check-installAs I mentioned before, all HDF5 tests finished successfully. And this is how I am trying to build the ncetcdf-c libraries:# define environment variables export UTILDIR="/usr/local/cesm-software"./configure CC=mpicc FC=mpif90 F77=mpif90 --prefix=/usr/local/cesm-software --disable-dap --disable-shared --enable-pnetcdf --enable-parallel-tests CPPFLAGS="-DgFortran -I${UTILDIR}/include" LDFLAGS="-L${UTILDIR}/lib" LIBS="-lhdf5_hl -lhdf5 -lz -ldl -lm"make; sudo make install; sudo make checkThe configure and make commands apparently finish successfully, but all 27 make-check tests fail. Please see both config.log and test-suite.log attached to this message.Based on the information I provided, does anyone have any tips on what can be causing the tests to fail and how to fix it?Thanks in advance, Thiago. -- /Thiago Veloso dos Santos/ /PhD student/ /Land and Atmospheric Science/ /University of Minnesota/ _______________________________________________ NOTE: All exchanges posted to Unidata maintained email lists are recorded in the Unidata inquiry tracking system and made publicly available through the web. Users who post to any of the lists we maintain are reminded to remove any personal information that they do not want to be made public. netcdfgroup mailing list netcdfgroup@xxxxxxxxxxxxxxxx For list information or to unsubscribe, visit: http://www.unidata.ucar.edu/mailing_lists/
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