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Ah yes, indeed, I had forgotten that libz and libzip are different. To answer your previous email, ‘configure’ tells me: # Compiling Options ----------------- C Compiler: /usr/bin/gcc -std=gnu11 CFLAGS: -O3 -fPIC -fomit-frame-pointer -fno-strict-aliasing CPPFLAGS: -I/home/sbasu/packages/include LDFLAGS: -L/home/sbasu/packages/lib AM_CFLAGS: AM_CPPFLAGS: AM_LDFLAGS: Shared Library: yes Static Library: yes Extra libraries: -lhdf5_hl -lhdf5 -lm -lz -ldl -lzip -lsz -lbz2 -lxml2 -lcurl XML Parser: libxml2 So yes, both -lz and -lzip are there. -Sourish > On 27 Sep, 2022, at 3:43 PM, Dennis Heimbigner <dmh@xxxxxxxx> wrote: > > Note that libz is not the same as libzip. > > On 9/27/2022 1:34 PM, Sourish Basu wrote: >> Configure “worked” in the sense it found libz (I think): >> >> # Features >> -------- >> NetCDF-2 API:yes >> HDF4 Support:no >> HDF5 Support:yes >> NetCDF-4 API:yes >> NC-4 Parallel Support:no >> PnetCDF Support:no >> DAP2 Support:yes >> DAP4 Support:yes >> Byte-Range Support:no >> Diskless Support:yes >> MMap Support:no >> JNA Support:no >> CDF5 Support:yes >> ERANGE Fill Support:no >> Relaxed Boundary Check:yes >> Parallel Filters: yes >> NCZarr Support:yes >> Multi-Filter Support:yes >> Quantization:yes >> Logging: no >> SZIP Write Support: yes >> Standard Filters: deflate bz2 szip >> ZSTD Support: no >> Benchmarks:no >> >> However, ‘make’ fails with the following: >> >> zmap_zip.c: At top level: >> zmap_zip.c:742:8: error: unknown type name 'zip_error_t' >> ziperr(zip_error_t* zerror) >> ^ >> make[2]: *** [libnczarr_la-zmap_zip.lo] Error 1 >> make[2]: Leaving directory >> `/local/home/sbasu/packages/src/netcdf-c-4.9.0/libnczarr' >> make[1]: *** [all-recursive] Error 1 >> make[1]: Leaving directory `/local/home/sbasu/packages/src/netcdf-c-4.9.0' >> make: *** [all] Error 2 >> >> So I’m not sure how I would ignore it. Are you suggesting that I proceed >> with ‘make install’ even though ‘make’ fails? >> >> -Sourish >> >>> On 27 Sep, 2022, at 3:07 PM, Dennis Heimbigner <dmh@xxxxxxxx> wrote: >>> >>> It is possible/probable that >>> > undefined reference to `zip_open’ >>> >>> is caused by configure trying to test >>> for the library. If the configure completes >>> and make check works, then you probably can >>> ignore that error. >>> >>> On 9/27/2022 9:01 AM, Sourish Basu wrote: >>>> Hello all, >>>> >>>> I’m trying to compile netcdf 4.9.0 on a linux machine, and it fails with >>>> several errors from zmap_zip.c. Error log attached. I’ve compiled netcdf >>>> on many platforms, but this error is new to me. I’ve checked that I have >>>> the zlib headers in /usr/include, and zlib-devel is installed. However, >>>> config.log does have an error message >>>> >>>> undefined reference to `zip_open’ >>>> >>>> Not sure if that’s important, because then later in that same file it says >>>> >>>> configure:8113: checking whether libzip library is available >>>> configure:8115: result: yes >>>> >>>> So not sure what to make of it. >>>> >>>> Thanks for any help, >>>> >>>> Sourish >>>> >>>> _______________________________________________ >>>> NOTE: All exchanges posted to Unidata maintained email lists are >>>> recorded in the Unidata inquiry tracking system and made publicly >>>> available through the web. Users who post to any of the lists we >>>> maintain are reminded to remove any personal information that they >>>> do not want to be made public. >>>> >>>> >>>> netcdfgroup mailing list >>>> netcdfgroup@xxxxxxxxxxxxxxxx >>>> For list information or to unsubscribe, >>>> visit:https://www.unidata.ucar.edu/mailing_lists/ >> >> >> _______________________________________________ >> NOTE: All exchanges posted to Unidata maintained email lists are >> recorded in the Unidata inquiry tracking system and made publicly >> available through the web. Users who post to any of the lists we >> maintain are reminded to remove any personal information that they >> do not want to be made public. >> >> >> netcdfgroup mailing list >> netcdfgroup@xxxxxxxxxxxxxxxx >> For list information or to unsubscribe, visit: >> https://www.unidata.ucar.edu/mailing_lists/ >
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