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Can you patch not just 4.2.4 but 4.2.2 - until we resolve what went on with our proxying we can not use 4.2.4. I am also wondering if what we were seeing was a very slow rebuild of the aggregations because so much was being printed out - which enormously slows done code, and the exceptions were happening because of the slow rebuild. -Roy On Feb 23, 2011, at 7:33 AM, John Caron wrote: > hi roy, kyle: > > it looks like an old version may have crept into the release, that turned on > a spurious debug message. we will get a fix out today i hope. > > im very interested in how 4.2.x handles aggregation, please keep me posted. > > thanks! > > > On 2/23/2011 8:27 AM, Roy Mendelssohn wrote: >> Okay it appears to have something to do with building the aggregations. On a >> clean start up, it went through every file and then stopped, at least for >> awhile. The problem is we have hundreds of thousands of files (yes this is >> correct two of our datasets alone are over 20.000 files), and catalina.out >> grows to be a very large size. I assume there must be a way to suppress >> writing this, but I don't know how. Up to these changes, our catlaina.out >> over even over a month from a "ls -l" was about 3400 or so , now in a few >> hours it is many (with the emphasis on many) orders of magnitude larger. >> >> -Roy >> >> >> >> >> On Feb 23, 2011, at 6:27 AM, Kyle Wilcox wrote: >> >>> I'm also seeing this in catalina.out >>> >>> ... >>> regexp .*\.nc$ on >>> /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0065.nc match=true >>> regexp .*\.nc$ on >>> /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0066.nc match=true >>> regexp .*\.nc$ on >>> /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0080.nc match=true >>> ... >>> >>> >>> [minime@testbedapps ~]# java -version >>> java version "1.6.0_21" >>> Java(TM) SE Runtime Environment (build 1.6.0_21-b06) >>> Java HotSpot(TM) 64-Bit Server VM (build 17.0-b16, mixed mode) >>> >>> THREDDS Data Server Version 4.2.1 Build Date = 2010-12-01 20:28:24 >>> Build Name = 1 >>> >>> >>>> -----Original Message----- >>>> From: thredds-bounces@xxxxxxxxxxxxxxxx [mailto:thredds- >>>> bounces@xxxxxxxxxxxxxxxx] On Behalf Of John Caron >>>> Sent: Tuesday, February 22, 2011 6:31 PM >>>> Cc: THREDDS community >>>> Subject: Re: [thredds] Fwd: Release Announcement: CPU11_01 Java SE >>>> Critical Patch Update >>>> >>>> On 2/22/2011 4:01 PM, Roy Mendelssohn wrote: >>>>> We did this update. Do to some other problems, I noticed our >>>> catalina.out was huge. We got expressions like: >>>>> regexp .*\.nc$ on regexp .*\.nc$ on >>>> /u00/satellite/cwtest2/aqua/modis/mercator/chlora/D1/MODSCW_P2009106_C3 >>>> _1755_1930_1935_GM05_closest_chlor >>>>> a.nc match=true >>>>> >>>>> that are filling up our catalina.out . No other changes were made. >>>> Even switching back to out old java does not seem to correct this. >>>>> Any ideas of what is going on? >>>>> >>>>> -Roy >>>> any chance theres a classpath problem, eg a spurious netcdf.jar from an >>>> old version ? >>>> >>>> >>>> _______________________________________________ >>>> thredds mailing list >>>> thredds@xxxxxxxxxxxxxxxx >>>> For list information or to unsubscribe, visit: >>>> http://www.unidata.ucar.edu/mailing_lists/ >>> _______________________________________________ >>> thredds mailing list >>> thredds@xxxxxxxxxxxxxxxx >>> For list information or to unsubscribe, visit: >>> http://www.unidata.ucar.edu/mailing_lists/ >> ********************** >> "The contents of this message do not reflect any position of the U.S. >> Government or NOAA." >> ********************** >> Roy Mendelssohn >> Supervisory Operations Research Analyst >> NOAA/NMFS >> Environmental Research Division >> Southwest Fisheries Science Center >> 1352 Lighthouse Avenue >> Pacific Grove, CA 93950-2097 >> >> e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) >> voice: (831)-648-9029 >> fax: (831)-648-8440 >> www: http://www.pfeg.noaa.gov/ >> >> "Old age and treachery will overcome youth and skill." >> "From those who have been given much, much will be expected" > ********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected"
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